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scnpilot_solids1_trim150_scaffold_72_curated_17

Organism: solids_Castellaniella_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(16576..17031)

Top 3 Functional Annotations

Value Algorithm Source
Biopolymer transport protein ExbD/TolR n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IQA4_BORPD similarity UNIREF
DB: UNIREF100
  • Identity: 68.3
  • Coverage: 161.0
  • Bit_score: 217
  • Evalue 1.30e-53
Biopolymer transport protein ExbD/TolR {ECO:0000313|EMBL:CDM24009.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.9
  • Coverage: 149.0
  • Bit_score: 249
  • Evalue 2.60e-63
exbD; biopolymer transport protein ExbD/TolR; K03559 biopolymer transport protein ExbD similarity KEGG
DB: KEGG
  • Identity: 68.3
  • Coverage: 161.0
  • Bit_score: 217
  • Evalue 4.10e-54

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 456
ATGGCATTCGGCAGCTTCGATTCCAAGGGGCCGGGCACGACCATGTCCGAGATCAACATGGTGCCGCTGATCGACGTGATGCTGGTGCTGCTGGTGATCTTCATCATCACCGCGCCCCTGCTCAGCCATTCGATCCGCATCAATGTGCCGCAGGTCACGGCGCAGCCGGTGGAGCAGCAGCCCAAGGTCGTCGATCTGGCCATCGACCCGAGCGGCGCGGTGTTCTGGAACGAGCAGCCCGTGGCCCTGGAGGACCTGGAATCCCGTTTCGCCGCGGAAGCCGGCGCCGATCCCCAGCCCGAGGTGCGCATCCGCGCCGACGTGGAGACCCGCTACGGCGAGCTGGCGCAGATCATGGGGGCCGCGCGGCGGGCCGGCATGAAGCGCCTGGGCTTCGTGACCCAGCCGGCGCCCGCCGCCCCGGCCGGCAAGGCCGCGCCGGCCTTGGGGGGCTGA
PROTEIN sequence
Length: 152
MAFGSFDSKGPGTTMSEINMVPLIDVMLVLLVIFIITAPLLSHSIRINVPQVTAQPVEQQPKVVDLAIDPSGAVFWNEQPVALEDLESRFAAEAGADPQPEVRIRADVETRYGELAQIMGAARRAGMKRLGFVTQPAPAAPAGKAAPALGG*