ggKbase | organisms

Consensus taxonomy: Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Metagenomic Context

Parent: SCNPILOT_SOLID_1_TRIM150_UNK Manually curated genome
Original version: SCNPILOT_SOLID_1_TRIM150_Flavobacteriales_40_4

Properties

Avg. coverage: 1.00 Longest contig: 8.95 Kbp Bin length: 1.31 Mbp GC content: 39.03 %

Contigs count: 814 Features count: 1669 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 13 / 55 BSCG 11 / 51 ASCG 2 / 38

Displaying items 201-250 of 814 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
scnpilot_solids1_trim150_scaffold_36612_curated Species: Flavobacterium sp. EM1321 (100%)	1	1137 bp	49.16	1.00	97.36
scnpilot_solids1_trim150_scaffold_10717_curated Species: Nonlabens dokdonensis (50%)	2	2741 bp	34.80	1.00	100.69
scnpilot_solids1_trim150_scaffold_24229_curated Species: Elizabethkingia meningoseptica (50%)	2	1533 bp	35.75	1.00	85.52
scnpilot_solids1_trim150_scaffold_30388_curated Species: Chryseobacterium soli (50%)	2	1233 bp	41.12	1.00	99.76
scnpilot_solids1_trim150_scaffold_15130_curated Order: Flavobacteriales (66.67%)	6	2144 bp	37.31	1.00	93.89
scnpilot_solids1_trim150_scaffold_13928_curated Species: Winogradskyella sp. PG-2 (100%)	1	2274 bp	34.48	1.00	80.21
scnpilot_solids1_trim150_scaffold_26130_curated Species: Gillisia limnaea (50%)	2	1380 bp	39.49	1.00	96.09
scnpilot_solids1_trim150_scaffold_42843_curated Species: Polaribacter sp. Hel1_85 (100%)	1	1011 bp	31.06	1.00	88.72
scnpilot_solids1_trim150_scaffold_36607_curated Species: Epilithonimonas sp. FH1 (100%)	1	1137 bp	31.57	1.00	91.03
scnpilot_solids1_trim150_scaffold_10278_curated Phylum: Bacteroidetes (66.67%)	3	2829 bp	38.81	1.00	97.67
scnpilot_solids1_trim150_scaffold_35746_curated Species: Elizabethkingia anophelis (100%)	1	915 bp	38.69	1.00	85.25
scnpilot_solids1_trim150_scaffold_24031_curated Species: R_Fluviicola_43_260 (50%)	2	1386 bp	40.19	1.00	99.13
scnpilot_solids1_trim150_scaffold_26506_curated Species: Chryseobacterium jeonii (50%)	2	1438 bp	38.39	1.00	75.52
scnpilot_solids1_trim150_scaffold_35755_curated	1	937 bp	42.80	1.00	98.61
scnpilot_solids1_trim150_scaffold_15230_curated Genus: Flavobacterium (66.67%)	3	2132 bp	36.82	1.00	96.53
scnpilot_solids1_trim150_scaffold_38552_curated Species: Chryseobacterium soli (50%)	2	1094 bp	37.66	1.00	92.96
scnpilot_solids1_trim150_scaffold_37264_curated Species: RLO_Flavobacteria_35_11 (100%)	1	1122 bp	34.31	1.00	70.59
scnpilot_solids1_trim150_scaffold_29179_curated Species: Elizabethkingia meningoseptica (50%)	2	1031 bp	45.20	1.00	100.10
scnpilot_solids1_trim150_scaffold_36267_curated Genus: Chryseobacterium (66.67%)	3	1144 bp	35.23	1.00	100.18
scnpilot_solids1_trim150_scaffold_38803_curated Species: Joostella marina (50%)	2	1090 bp	37.34	1.00	99.63
scnpilot_solids1_trim150_scaffold_24795_curated	3	1508 bp	41.98	1.00	85.15
scnpilot_solids1_trim150_scaffold_14544_curated Species: Paenibacillus stellifer (50%)	2	2207 bp	37.47	1.00	61.30
scnpilot_solids1_trim150_scaffold_24318_curated Species: Elizabethkingia meningoseptica (50%)	2	1528 bp	43.65	1.00	99.15
scnpilot_solids1_trim150_scaffold_42060_curated	3	771 bp	42.28	1.00	102.34
scnpilot_solids1_trim150_scaffold_31631_curated Species: Pedobacter heparinus (50%)	2	1230 bp	50.65	1.00	99.76
scnpilot_solids1_trim150_scaffold_21898_curated Species: Niastella koreensis (50%)	2	1542 bp	43.26	1.00	93.00
scnpilot_solids1_trim150_scaffold_36262_curated Species: Fluviicola taffensis (100%)	2	1145 bp	44.54	1.00	99.30
scnpilot_solids1_trim150_scaffold_22965_curated	1	1595 bp	37.74	1.00	17.12
scnpilot_solids1_trim150_scaffold_16182_curated Species: R_Fluviicola_43_260 (50%)	2	1981 bp	38.26	1.00	81.93
scnpilot_solids1_trim150_scaffold_34538_curated Species: GWB1_Spirochaetes_36_13_curated (50%)	2	1187 bp	36.31	1.00	53.33
scnpilot_solids1_trim150_scaffold_42166_curated Species: Fluviicola taffensis (100%)	1	1023 bp	45.45	1.00	100.00
scnpilot_solids1_trim150_scaffold_32658_curated Species: Chryseobacterium jeonii (50%)	2	1235 bp	38.95	1.00	100.81
scnpilot_solids1_trim150_scaffold_37599_curated Species: Nonlabens ulvanivorans (50%)	2	914 bp	38.95	1.00	100.44
scnpilot_solids1_trim150_scaffold_6070_curated Species: Flavobacterium beibuense (80%)	5	3880 bp	43.35	1.00	99.90
scnpilot_solids1_trim150_scaffold_36511_curated Species: Flavobacterium sp. EM1308 (100%)	1	1139 bp	42.32	1.00	66.90
scnpilot_solids1_trim150_scaffold_23641_curated Species: Cellulophaga geojensis (50%)	2	1562 bp	33.23	1.00	71.64
scnpilot_solids1_trim150_scaffold_33552_curated Species: Tamlana nanhaiensis (100%)	1	1223 bp	36.30	1.00	98.86
scnpilot_solids1_trim150_scaffold_72930_curated Species: Algibacter lectus (66.67%)	3	1350 bp	44.07	1.00	97.78
scnpilot_solids1_trim150_scaffold_26223_curated Species: Fluviicola taffensis (100%)	1	1449 bp	42.17	1.00	88.61
scnpilot_solids1_trim150_scaffold_38091_curated Species: Chryseobacterium indologenes (100%)	1	1104 bp	38.13	1.00	72.83
scnpilot_solids1_trim150_scaffold_36974_curated Species: R_Fluviicola_43_260 (100%)	1	961 bp	40.37	1.00	84.60
scnpilot_solids1_trim150_scaffold_17943_curated Species: Gillisia limnaea (100%)	1	1896 bp	34.44	1.00	79.75
scnpilot_solids1_trim150_scaffold_26224_curated Species: R_Fluviicola_43_260 (100%)	1	1409 bp	36.91	1.00	98.15
scnpilot_solids1_trim150_scaffold_33433_curated Phylum: Bacteroidetes (66.67%)	3	1214 bp	44.81	1.00	94.40
scnpilot_solids1_trim150_scaffold_20446_curated Species: Elizabethkingia miricola (50%)	2	1732 bp	38.86	1.00	56.64
scnpilot_solids1_trim150_scaffold_29529_curated Species: R_Fluviicola_43_260 (50%)	2	1174 bp	43.53	1.00	99.40
scnpilot_solids1_trim150_scaffold_30367_curated Species: Niastella koreensis (50%)	2	1303 bp	27.40	1.00	24.18
scnpilot_solids1_trim150_scaffold_27077_curated Species: Flavobacterium sp. MEB061 (50%)	2	1416 bp	49.08	1.00	99.15
scnpilot_solids1_trim150_scaffold_29679_curated Species: BJP_IG2102_Flavobacteriales_34_12 (50%)	2	1324 bp	39.05	1.00	88.60
scnpilot_solids1_trim150_scaffold_39813_curated Species: Chryseobacterium formosense (50%)	2	879 bp	42.89	1.00	95.22

Displaying items 201-250 of 814 in total

solids_Flavobacteriales_1

SCNPILOT_SOLID_1_TRIM150_Flavobacteriales_39_1

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

solids_Flavobacteriales_1

SCNPILOT_SOLID_1_TRIM150_Flavobacteriales_39_1

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

Processing

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