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scnpilot_solids1_trim150_scaffold_1873_curated

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1873_curated_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(3..869)
DNA (867bp) protein (289aa)
Uncharacterized protein {ECO:0000313|EMBL:AHG93506.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
membrane associated hydrolase id=24498641 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
scnpilot_solids1_trim150_scaffold_1873_curated_2
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1229..2596)
DNA (1368bp) protein (456aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035D72BB
Type I phosphodiesterase/nucleotide pyrophosphatase {ECO:0000313|EMBL:EIL97112.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative AP superfamily protein
scnpilot_solids1_trim150_scaffold_1873_curated_3
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(2770..3843)
DNA (1074bp) protein (358aa)
tartrate dehydrogenase/tartrate decarboxylase/D-malate dehydrogenase (EC:1.1.1.83 1.1.1.93 4.1.1.73); K07246 tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
Tartrate dehydrogenase/tartrate decarboxylase/D-malate dehydrogenase {ECO:0000313|EMBL:BAH40594.1}; EC=1.1.1.83 {ECO:0000313|EMBL:BAH40594.1};; EC=1.1.1.93 {ECO:0000313|EMBL:BAH40594.1};; EC=4.1.1.73 {ECO:0000313|EMBL:BAH40594.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
Tartrate dehydrogenase/tartrate decarboxylase/D-malate dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ADL7_GEMAT
scnpilot_solids1_trim150_scaffold_1873_curated_4
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(3860..4645)
DNA (786bp) protein (262aa)
Putative oxidoreductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ADL6_GEMAT
putative oxidoreductase
Putative oxidoreductase {ECO:0000313|EMBL:BAH40593.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
scnpilot_solids1_trim150_scaffold_1873_curated_5
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(4652..6085)
DNA (1434bp) protein (478aa)
Putative sodium/solute symporter n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ADL5_GEMAT
putative sodium/solute symporter; K03307 solute:Na+ symporter, SSS family
Putative sodium/solute symporter {ECO:0000313|EMBL:BAH40592.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
scnpilot_solids1_trim150_scaffold_1873_curated_6
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

6320..7600
DNA (1281bp) protein (427aa)
succinyl-diaminopimelate desuccinylase; K01439 succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
DapE-ArgE family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ADL4_GEMAT
DapE-ArgE family protein {ECO:0000313|EMBL:BAH40591.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
scnpilot_solids1_trim150_scaffold_1873_curated_7
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

9206..10780
DNA (1575bp) protein (525aa)
Putative outer membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ADL3_GEMAT
putative outer membrane protein
Putative outer membrane protein {ECO:0000313|EMBL:BAH40590.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
scnpilot_solids1_trim150_scaffold_1873_curated_8
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

10783..12249
DNA (1467bp) protein (489aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ADL2_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH40589.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
scnpilot_solids1_trim150_scaffold_1873_curated_9
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

12266..13435
DNA (1170bp) protein (390aa)
Peptidase S58 family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ADL1_GEMAT
peptidase S58 family protein
Peptidase S58 family protein {ECO:0000313|EMBL:BAH40588.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
scnpilot_solids1_trim150_scaffold_1873_curated_10
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

13542..14573
DNA (1032bp) protein (344aa)
Beta-lactamase domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02B47_SOLUE
beta-lactamase domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
scnpilot_solids1_trim150_scaffold_1873_curated_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

14632..16140
DNA (1509bp) protein (503aa)
methylmalonate-semialdehyde dehydrogenase; K00140 malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
Methylmalonate-semialdehyde dehydrogenase {ECO:0000313|EMBL:AHG90574.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Methylmalonate-semialdehyde dehydrogenase id=4115891 bin=GWF2_Bacteroidetes_41_31 species=Mucilaginibacter paludis genus=Mucilaginibacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
scnpilot_solids1_trim150_scaffold_1873_curated_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

16152..17483
DNA (1332bp) protein (444aa)
beta alanine--pyruvate transaminase; K00822 beta-alanine--pyruvate transaminase [EC:2.6.1.18]
omega amino acid--pyruvate aminotransferase n=1 Tax=Novispirillum itersonii RepID=UPI00036F19DA
Aminotransferase class-III {ECO:0000313|EMBL:AHG88565.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
scnpilot_solids1_trim150_scaffold_1873_curated_13
Francisella guangzhouensis, Francisella, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17711..18487
DNA (777bp) protein (259aa)
Acid phosphatase, HAD superfamily protein n=5 Tax=Francisella novicida RepID=A0Q6T3_FRATN
HAD family hydrolase {ECO:0000313|EMBL:AJC49142.1}; TaxID=594679 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Francisellaceae; Francisella.;" source="Francisella guangzhouensis.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1873_curated_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(18609..19781)
DNA (1173bp) protein (391aa)
Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67L49_SYMTH
Uncharacterized protein {ECO:0000313|EMBL:AHG89264.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
Displaying 14 items

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