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scnpilot_solids1_trim150_scaffold_894_curated

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Displaying 27 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_894_curated_1
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(1..1428)
DNA (1428bp) protein (476aa)
putative 2-oxoglutarate ferredoxin-oxidoreductase alpha subunit; K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3]
Putative 2-oxoglutarate ferredoxin-oxidoreductase alpha subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB17_GEMAT
Putative 2-oxoglutarate ferredoxin-oxidoreductase alpha subunit {ECO:0000313|EMBL:BAH39423.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
scnpilot_solids1_trim150_scaffold_894_curated_2
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(1425..3245)
DNA (1821bp) protein (607aa)
gltD; glutamate synthase small subunit (EC:1.4.1.13)
Glutamate synthase small subunit {ECO:0000313|EMBL:BAH39422.1}; EC=1.4.1.13 {ECO:0000313|EMBL:BAH39422.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
Glutamate synthase small subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB16_GEMAT
scnpilot_solids1_trim150_scaffold_894_curated_3
Litoreibacter arenae, Litoreibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3708..5090
DNA (1383bp) protein (461aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=1123360 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Litoreibacter.;" source="Litoreibacter arenae DSM 19593.;"
atpD1; F0F1 ATP synthase subunit beta; K02112 F-type H+-transporting ATPase subunit beta [EC:3.6.3.14]
ATP synthase subunit beta n=1 Tax=Thalassobacter arenae DSM 19593 RepID=S9QA33_9RHOB
scnpilot_solids1_trim150_scaffold_894_curated_4
Litoreibacter arenae, Litoreibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5087..5497
DNA (411bp) protein (137aa)
atpC2; ATP synthase F1 subunit epsilon; K02114 F-type H+-transporting ATPase subunit epsilon [EC:3.6.3.14]
ATP synthase epsilon chain n=1 Tax=Thalassobacter arenae DSM 19593 RepID=S9RJD8_9RHOB
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxID=1123360 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Litoreibacter.;" source="Litoreibacter arenae DSM 19593.;"
scnpilot_solids1_trim150_scaffold_894_curated_5
Dinoroseobacter shibae, Dinoroseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5548..5781
DNA (234bp) protein (78aa)
ATP synthase F0F1, subunit {ECO:0000313|EMBL:ABV92185.1}; EC=3.6.3.14 {ECO:0000313|EMBL:ABV92185.1};; TaxID=398580 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Dinoroseobacter.;" source="Dinoroseobacter shibae (strain DSM 16493 / NCIMB 14021 / DFL 12).;"
ATP synthase F0F1, subunit n=1 Tax=Dinoroseobacter shibae (strain DFL 12) RepID=A8LN41_DINSH
ATP synthase F0F1 subunit; K02116 ATP synthase protein I
scnpilot_solids1_trim150_scaffold_894_curated_6
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5778..6080
DNA (303bp) protein (101aa)
Putative uncharacterized protein n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 PF8_9RHOB">RepID=D0CPF8_9RHOB
NODE_41, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ96272.1}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter sp. A03.;"
ATP synthase F0F1 subunit
scnpilot_solids1_trim150_scaffold_894_curated_7
Celeribacter indicus, Celeribacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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6071..6772
DNA (702bp) protein (234aa)
atpB2; F0F1 ATP synthase subunit A; K02108 F-type H+-transporting ATPase subunit a [EC:3.6.3.14]
ATP synthase subunit a n=1 Tax=Dinoroseobacter shibae (strain DFL 12) RepID=A8LN43_DINSH
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=1208324 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Celeribacter.;" source="Celeribacter indicus.;"
scnpilot_solids1_trim150_scaffold_894_curated_8
Litoreibacter arenae, Litoreibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6769..7059
DNA (291bp) protein (97aa)
atpE1; F0F1 ATP synthase subunit C; K02110 F-type H+-transporting ATPase subunit c [EC:3.6.3.14]
ATP synthase C chain n=1 Tax=Thalassobacter arenae DSM 19593 RepID=S9QA31_9RHOB
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242778}; TaxID=1123360 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Litoreibacter.;" source="Litoreibacter arenae DSM 19593.;"
scnpilot_solids1_trim150_scaffold_894_curated_9

Not on your lists

7062..7829
DNA (768bp) protein (256aa)
atpF1; ATP synthase F0 subunit B; K02109 F-type H+-transporting ATPase subunit b [EC:3.6.3.14]
ATP synthase subunit b n=1 Tax=Thalassobacter arenae DSM 19593 RepID=S9RJD5_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KKM24216.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
scnpilot_solids1_trim150_scaffold_894_curated_10
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7819..9354
DNA (1536bp) protein (512aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter sp. A03.;"
atpA2; ATP synthase F1 subunit alpha; K02111 F-type H+-transporting ATPase subunit alpha [EC:3.6.3.14]
ATP synthase subunit alpha n=1 Tax=Thalassobacter arenae DSM 19593 RepID=S9RW47_9RHOB
scnpilot_solids1_trim150_scaffold_894_curated_11
Celeribacter indicus, Celeribacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9338..10240
DNA (903bp) protein (301aa)
atpG1; ATP synthase F1 subunit gamma; K02115 F-type H+-transporting ATPase subunit gamma [EC:3.6.3.14]
ATP synthase gamma chain n=1 Tax=Thalassobacter arenae DSM 19593 RepID=S9QF65_9RHOB
ATP synthase F1 subunit gamma {ECO:0000313|EMBL:AJE48439.1}; TaxID=1208324 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Celeribacter.;" source="Celeribacter indicus.;"
scnpilot_solids1_trim150_scaffold_894_curated_12
BJP_08E140C01_Syntrophobacterales_43_19, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10293..10508
DNA (216bp) protein (72aa)
hypothetical protein id=17400175 bin=RBG_16_Aminicenantes_63_14 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_16_Aminicenantes_63_14 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
Tax=BJP_08E140C01_Syntrophobacterales_43_19
scnpilot_solids1_trim150_scaffold_894_curated_13
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10699..12315
DNA (1617bp) protein (539aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000345D693
Uncharacterized protein {ECO:0000313|EMBL:KGI76945.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
enterochelin esterase-like enzyme
scnpilot_solids1_trim150_scaffold_894_curated_14
Synechococcus sp. WH 8016, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(12372..13598)
DNA (1227bp) protein (409aa)
Lanthionine synthetase C family protein n=1 Tax=Serinicoccus profundi RepID=UPI000255E921
Lanthionine synthetase C family protein {ECO:0000313|EMBL:EHA62218.1}; TaxID=166318 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. WH 8016.;"
scnpilot_solids1_trim150_scaffold_894_curated_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(13595..14413)
DNA (819bp) protein (273aa)
Lanthionine synthetase C family protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01SQ5_SOLUE
lanthionine synthetase C family protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
scnpilot_solids1_trim150_scaffold_894_curated_16
Cylindrospermum stagnale, Cylindrospermum, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(14606..15607)
DNA (1002bp) protein (334aa)
Phosphotransferase family protein n=1 Tax=Cylindrospermum stagnale PCC 7417 RepID=K9X4F3_9NOST
phosphotransferase family protein
Phosphotransferase family protein {ECO:0000313|EMBL:AFZ27535.1}; TaxID=56107 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Cylindrospermum.;" source="Cylindrospermum stagnale PCC 7417.;"
scnpilot_solids1_trim150_scaffold_894_curated_17
Knoellia flava, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15609..16979)
DNA (1371bp) protein (457aa)
Uncharacterized protein n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TIT6_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KGN30598.1}; TaxID=1385518 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia flava TL1.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_894_curated_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

17271..18857
DNA (1587bp) protein (529aa)
Putative amidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9Z8_GEMAT
Amidase {ECO:0000313|EMBL:AHG93900.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
putative amidase
scnpilot_solids1_trim150_scaffold_894_curated_19
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19003..19353)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CKM6_ELIME
Iron-sulfur cluster repair di-iron protein {ECO:0000313|EMBL:KGO11791.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (Chryseobacterium miricola).;"
Nitric oxide-dependent regulator DnrN or NorA; K07322 regulator of cell morphogenesis and NO signaling
scnpilot_solids1_trim150_scaffold_894_curated_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(19943..22210)
DNA (2268bp) protein (756aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00036B9918
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
scnpilot_solids1_trim150_scaffold_894_curated_21
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

22404..23150
DNA (747bp) protein (249aa)
Probable transcriptional regulatory protein IALB_0317 n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AGC2_IGNAJ
Probable transcriptional regulatory protein J421_2581 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_894_curated_22
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

23436..25169
DNA (1734bp) protein (578aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC95_GEMAT
hypothetical membrane protein
Hypothetical membrane protein {ECO:0000313|EMBL:BAH40122.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
scnpilot_solids1_trim150_scaffold_894_curated_23
GWB2_Chloroflexi_54_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(25383..25772)
DNA (390bp) protein (130aa)
Putative uncharacterized protein id=2272791 bin=GWB2_Chloroflexi_54_36 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
putative snoaL-like polyketide cyclase
Tax=GWB2_Chloroflexi_54_36_curated
scnpilot_solids1_trim150_scaffold_894_curated_24
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

25983..26393
DNA (411bp) protein (137aa)
hypothetical protein id=24418765 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
lactoylglutathione lyase-like lyase; K07032
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
scnpilot_solids1_trim150_scaffold_894_curated_25
Chryseobacterium solincola, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

26453..26749
DNA (297bp) protein (99aa)
Putative uncharacterized protein n=1 Tax=Bizionia argentinensis JUB59 RepID=G2EAN8_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KIA82318.1}; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium solincola.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_894_curated_26
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26915..27529
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Brevibacterium sp. JC43 RepID=UPI0002FBBB20
SAM-dependent methyltransferase {ECO:0000313|EMBL:KDA06375.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
methyltransferase
scnpilot_solids1_trim150_scaffold_894_curated_27
Belliella baltica, Belliella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(27620..29113)
DNA (1494bp) protein (498aa)
Dipeptidyl aminopeptidase/acylaminoacyl peptidase n=1 Tax=Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134) RepID=I3Z8Y1_BELBD
dipeptidyl aminopeptidase/acylaminoacyl peptidase
Dipeptidyl aminopeptidase/acylaminoacyl peptidase {ECO:0000313|EMBL:AFL85699.1}; Flags: Precursor;; TaxID=866536 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Belliella.;" source="Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134).;"
Displaying 27 items

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