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scnpilot_solids1_trim150_scaffold_1968_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1968_curated_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(1..1173)
DNA (1173bp) protein (391aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ACB2_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:AHG92753.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical membrane protein
scnpilot_solids1_trim150_scaffold_1968_curated_2
RBG_13_Planctomycetes_62_9_curated, Phycisphaerae, Planctomycetes, Bacteria

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1367..2143
DNA (777bp) protein (259aa)
Phosphoesterase PA-phosphatase related n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IIF4_XANP2
PA-phosphatase-like phosphoesterase
Tax=RBG_13_Planctomycetes_62_9_curated
scnpilot_solids1_trim150_scaffold_1968_curated_3
unknown

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2795..3352
DNA (558bp) protein (186aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1968_curated_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(3466..4188)
DNA (723bp) protein (241aa)
1,4-alpha-glucan branching protein; K00700 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
1,4-alpha-glucan branching enzyme GlgB n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AZ96_9FIRM
Glycoside hydrolase family 13 domain protein {ECO:0000313|EMBL:AHG90698.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
scnpilot_solids1_trim150_scaffold_1968_curated_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(4181..4738)
DNA (558bp) protein (186aa)
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3L0_GEMAT
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AHG92078.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
scnpilot_solids1_trim150_scaffold_1968_curated_6
Desulfotignum phosphitoxidans, Desulfotignum, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4777..5763)
DNA (987bp) protein (329aa)
Mrr restriction endonuclease Mrr n=1 Tax=Desulfotignum phosphitoxidans DSM 13687 RepID=S0G1P5_9DELT
Mrr restriction endonuclease Mrr {ECO:0000313|EMBL:EMS81233.1}; TaxID=1286635 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfotignum.;" source="Desulfotignum phosphitoxidans DSM 13687.;"
restriction endonuclease
scnpilot_solids1_trim150_scaffold_1968_curated_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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6180..7292
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAH4_GEMAT
Radical SAM domain protein {ECO:0000313|EMBL:AHG93511.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1968_curated_8
unknown

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7296..8189
DNA (894bp) protein (298aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1968_curated_9
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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8300..10042
DNA (1743bp) protein (581aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAH6_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH39774.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
Displaying 9 items

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