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scnpilot_solids1_trim150_scaffold_2592_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2592_curated_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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3..80
DNA (78bp) protein (26aa)
aguA; agmatine deiminase (EC:3.5.3.12); K10536 agmatine deiminase [EC:3.5.3.12] id=12556139 bin=CNBR_ACIDO species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
aguA; agmatine deiminase (EC:3.5.3.12); K10536 agmatine deiminase [EC:3.5.3.12]
Porphyromonas-type peptidyl-arginine deiminase {ECO:0000313|EMBL:AHG91773.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
scnpilot_solids1_trim150_scaffold_2592_curated_2
unknown

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77..1144
DNA (1068bp) protein (356aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2592_curated_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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1252..1968
DNA (717bp) protein (239aa)
Probable transcriptional regulatory protein GAU_0635 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=Y635_GEMAT
Probable transcriptional regulatory protein J421_2581 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2592_curated_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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1997..2527
DNA (531bp) protein (177aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ruvC; Holliday junction endonuclease RuvC (EC:3.1.22.4); K01159 crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4]
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A616_GEMAT
scnpilot_solids1_trim150_scaffold_2592_curated_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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2524..3123
DNA (600bp) protein (200aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ruvA; Holliday junction DNA helicase RuvA; K03550 holliday junction DNA helicase RuvA [EC:3.6.4.12]
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RUVA_GEMAT
scnpilot_solids1_trim150_scaffold_2592_curated_6
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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3482..4219
DNA (738bp) protein (246aa)
PEP-CTERM exosortase interaction domain protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZVM7_9PROT
PEP-CTERM motif protein {ECO:0000313|EMBL:GAM10005.1}; Flags: Precursor;; TaxID=1266765 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2592_curated_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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4536..5654
DNA (1119bp) protein (373aa)
kynurenine--oxoglutarate transaminase (EC:2.6.1.7); K10907 aminotransferase [EC:2.6.1.-]
Kynurenine--oxoglutarate transaminase n=1 Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8B1R8_FRADG
Aminotransferase class I and II {ECO:0000313|EMBL:AHG90114.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
scnpilot_solids1_trim150_scaffold_2592_curated_8
unknown

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comp(5755..6210)
DNA (456bp) protein (152aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2592_curated_9
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6424..7632)
DNA (1209bp) protein (403aa)
Putative protease n=1 Tax=Methylocystis sp. (strain SC2) RepID=J7QGU5_METSZ
protease
Putative protease {ECO:0000313|EMBL:CCJ07181.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
scnpilot_solids1_trim150_scaffold_2592_curated_10
unknown

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comp(7730..7825)
DNA (96bp) protein (32aa)

This feature has no annotations

Displaying 10 items

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