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scnpilot_solids1_trim150_scaffold_1293_curated_4

Organism: solids_Gemmatimonadetes_1

near complete RP 47 / 55 BSCG 47 / 51 MC: 2 ASCG 13 / 38
Location: 2283..2531

Top 3 Functional Annotations

Value Algorithm Source
Mismatched base pair and cruciform DNA recognition protein n=7 Tax=Pseudomonas syringae group genomosp. 2 RepID=F3EKR4_PSESL similarity UNIREF
DB: UNIREF100
  • Identity: 47.4
  • Coverage: 57.0
  • Bit_score: 58
  • Evalue 4.30e-06
General stress protein CsbD {ECO:0000313|EMBL:KDR37758.1}; TaxID=60547 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glathei.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.1
  • Coverage: 64.0
  • Bit_score: 59
  • Evalue 2.10e-06
mismatched base pair and cruciform DNA recognition protein similarity KEGG
DB: KEGG
  • Identity: 47.4
  • Coverage: 57.0
  • Bit_score: 58
  • Evalue 1.30e-06

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Taxonomy

Burkholderia glathei → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 249
ATGAGCGACCTGGATCGCAAGGGCATGGAGAACCGTGCCAGGGGTATGGCAAAGGAAGCGGAAGGAAAGGTGCGCGACGCTGTAGGCGACGCCATGGACGATACCAGCCAGCAGTTGAAGGGCAAGGCGCAACAGGTGAAGGGCAAGGCGCAGCAAGGCCTGGGCAAGGCGCAGCAAGGGATTGCCGACGCCATGGACGGCGATGACAAGCCCGGGCATCGGACGCCCAAGGGCGACAGCCGCGTCTGA
PROTEIN sequence
Length: 83
MSDLDRKGMENRARGMAKEAEGKVRDAVGDAMDDTSQQLKGKAQQVKGKAQQGLGKAQQGIADAMDGDDKPGHRTPKGDSRV*