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scnpilot_solids1_trim150_scaffold_1293_curated

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1293_curated_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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2..610
DNA (609bp) protein (203aa)
TonB-dependent outer membrane transport protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9M9_GEMAT
TonB-dependent receptor plug {ECO:0000313|EMBL:AHG87880.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
TonB-dependent outer membrane transport protein; K02014 iron complex outermembrane recepter protein
scnpilot_solids1_trim150_scaffold_1293_curated_2
Nitrosococcus watsonii, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(703..1275)
DNA (573bp) protein (191aa)
Putative uncharacterized protein n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8K512_NITWC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ27989.1}; TaxID=105559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus watsoni (strain C-113).;"
scnpilot_solids1_trim150_scaffold_1293_curated_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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1431..2150
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEA7_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:AHG91439.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1293_curated_4
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2283..2531
DNA (249bp) protein (83aa)
Mismatched base pair and cruciform DNA recognition protein n=7 Tax=Pseudomonas syringae group genomosp. 2 RepID=F3EKR4_PSESL
General stress protein CsbD {ECO:0000313|EMBL:KDR37758.1}; TaxID=60547 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glathei.;"
mismatched base pair and cruciform DNA recognition protein
scnpilot_solids1_trim150_scaffold_1293_curated_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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2635..4452
DNA (1818bp) protein (606aa)
Peptidoglycan binding domain protein n=1 Tax=Salinisphaera shabanensis E1L3A RepID=U2FWU9_9GAMM
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:AHG89531.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
peptidoglycan binding domain-containing protein
scnpilot_solids1_trim150_scaffold_1293_curated_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(4487..4837)
DNA (351bp) protein (117aa)
Predicted membrane protein n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EYS1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AHG89485.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Predicted membrane protein
scnpilot_solids1_trim150_scaffold_1293_curated_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(4912..5748)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9U9N5_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:AHG89486.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1293_curated_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(5931..6776)
DNA (846bp) protein (282aa)
Nitrous-oxide metabolic protein NosY {ECO:0000313|EMBL:AHG92563.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Copper ABC-type transport system, permease component NosY id=4268870 bin=GWA2_Ignavibacteria-rel_35_8 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
nitrous oxide metabolic protein NosY
scnpilot_solids1_trim150_scaffold_1293_curated_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(6773..7498)
DNA (726bp) protein (242aa)
ABC transporter related protein {ECO:0000313|EMBL:AHG92564.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Copper-transport ATP-binding protein NosF id=2671846 bin=GWC2_Ignavibacteria_38_9 species=Persephonella marina genus=Persephonella taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
ABC transporter ATPase
scnpilot_solids1_trim150_scaffold_1293_curated_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(7498..8940)
DNA (1443bp) protein (481aa)
Putative nitrous oxidase accessory protein NosD n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A864_GEMAT
Nitrous oxide reductase family maturation protein NosD {ECO:0000313|EMBL:AHG92565.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
nosD; putative nitrous oxidase accessory protein NosD; K07218 nitrous oxidase accessory protein
scnpilot_solids1_trim150_scaffold_1293_curated_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(8924..9385)
DNA (462bp) protein (154aa)
Nitrous-oxide reductase accessory protein NosL n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6ZQJ4_MELRP
NosL family protein {ECO:0000313|EMBL:AHG92566.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
nitrous-oxide reductase accessory protein NosL
scnpilot_solids1_trim150_scaffold_1293_curated_12
Hydrogenivirga sp. 128-5-R1-1, Hydrogenivirga, Aquificales, Aquificae, Aquificae, Bacteria

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comp(9520..10167)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UXA4_9AQUI
Uncharacterized protein {ECO:0000313|EMBL:EDP74728.1}; TaxID=392423 species="Bacteria; Aquificae; Aquificales; Aquificaceae; Hydrogenivirga.;" source="Hydrogenivirga sp. 128-5-R1-1.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1293_curated_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(10167..12251)
DNA (2085bp) protein (695aa)
nosZ; putative nitrous oxide reductase (EC:1.7.99.6); K00376 nitrous-oxide reductase [EC:1.7.2.4]
Putative nitrous oxide reductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A867_GEMAT
Nitrous-oxide reductase, Sec-dependent {ECO:0000313|EMBL:AHG92568.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
scnpilot_solids1_trim150_scaffold_1293_curated_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(12581..13273)
DNA (693bp) protein (231aa)
YceI family protein {ECO:0000313|EMBL:AHG92428.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein id=1247565 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
hypothetical protein
scnpilot_solids1_trim150_scaffold_1293_curated_15
unknown

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13571..13849
DNA (279bp) protein (93aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1293_curated_16
unknown

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13853..14254
DNA (402bp) protein (134aa)

This feature has no annotations

Displaying 16 items

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