ggKbase home page

scnpilot_solids1_trim150_scaffold_1476_curated_12

Organism: solids_Gemmatimonadetes_1

near complete RP 47 / 55 BSCG 47 / 51 MC: 2 ASCG 13 / 38
Location: comp(9459..9833)

Top 3 Functional Annotations

Value Algorithm Source
Putative DNA-binding protein HU n=1 Tax=Gordonia namibiensis NBRC 108229 RepID=K6XKT9_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 49.2
  • Coverage: 124.0
  • Bit_score: 118
  • Evalue 5.20e-24
Histone family protein DNA-binding protein {ECO:0000313|EMBL:AHG88812.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.2
  • Coverage: 98.0
  • Bit_score: 121
  • Evalue 6.60e-25
DNA-binding protein HU hupB similarity KEGG
DB: KEGG
  • Identity: 46.2
  • Coverage: 143.0
  • Bit_score: 114
  • Evalue 1.80e-23

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 375
ATGAATCGAGCTGAGTTGATCGACGCGCTCGCCGAGCGGCTGGACATGTCGCGGCGTGAAGCTGGCGACGTCGTCGCGGCGCTGTTCAATCCGACTGAAGGCGTTATAGCCAAGGCCCTCAAGAAGGGCGAGGTGATCTCGCTTACCGGCTTCGGCGCCTTCGGCGTCCGCAAGCGCAGTGCTCGCACCGCGCGCAACCCGCAGACCGGCGAACCGATCAAGGTCGCGGCCACCAAGGTTCCAGCCTTCAAGGCGGGCGCCAGCCTCAAGGCCACGATCAGTGGCAAGGGCAAGACAGCGGCAAAGCCGGCCGCCAAGAAGGGCGCGGCCAAGAAGGCCACCAAGTCGGCCAAGCCAGCCAAGCGGGCGCGCTGA
PROTEIN sequence
Length: 125
MNRAELIDALAERLDMSRREAGDVVAALFNPTEGVIAKALKKGEVISLTGFGAFGVRKRSARTARNPQTGEPIKVAATKVPAFKAGASLKATISGKGKTAAKPAAKKGAAKKATKSAKPAKRAR*