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scnpilot_solids1_trim150_scaffold_1476_curated

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1476_curated_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(40..462)
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037E491F
Regulatory protein ArsR {ECO:0000313|EMBL:AHG88546.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
transcriptional regulator
scnpilot_solids1_trim150_scaffold_1476_curated_2
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(455..1072)
DNA (618bp) protein (206aa)
Putative uncharacterized protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJU1_CHLTF
hypothetical protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
scnpilot_solids1_trim150_scaffold_1476_curated_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(1188..1871)
DNA (684bp) protein (228aa)
intracellular protease, PfpI family; K05520 protease I [EC:3.2.-.-]
ThiJ/PfpI family protein n=1 Tax=Rhodovulum sp. PH10 RepID=J9DCN9_9RHOB
Intracellular protease, PfpI family {ECO:0000313|EMBL:AHG91331.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
scnpilot_solids1_trim150_scaffold_1476_curated_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

1967..3067
DNA (1101bp) protein (367aa)
holB; DNA polymerase III delta' subunit (EC:2.7.7.7); K02341 DNA polymerase III subunit delta' [EC:2.7.7.7]
DNA polymerase III delta' subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9U0_GEMAT
DNA polymerase III delta' subunit {ECO:0000313|EMBL:AHG91334.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
scnpilot_solids1_trim150_scaffold_1476_curated_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

3057..3668
DNA (612bp) protein (204aa)
Cyclic pyranopterin monophosphate synthase accessory protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KYC0_HALNC
Cyclic pyranopterin monophosphate synthase accessory protein {ECO:0000256|HAMAP-Rule:MF_01224}; Molybdenum cofactor biosynthesis protein C {ECO:0000256|HAMAP-Rule:MF_01224}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
molybdenum cofactor biosynthesis protein C; K03637 molybdenum cofactor biosynthesis protein C
scnpilot_solids1_trim150_scaffold_1476_curated_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

3754..4458
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9U2_GEMAT
Lytic transglycosylase catalytic {ECO:0000313|EMBL:AHG91336.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1476_curated_7
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(4611..6143)
DNA (1533bp) protein (511aa)
putative transglycosylase; K08307 membrane-bound lytic murein transglycosylase D [EC:3.2.1.-]
Putative transglycosylase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9U3_GEMAT
Putative transglycosylase {ECO:0000313|EMBL:BAH39270.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
scnpilot_solids1_trim150_scaffold_1476_curated_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(6297..6746)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9U4_GEMAT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
scnpilot_solids1_trim150_scaffold_1476_curated_9
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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7024..7977
DNA (954bp) protein (318aa)
beta-lactamase; K01467 beta-lactamase [EC:3.5.2.6]
Beta-lactamase n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FNK7_STIAD
Beta-lactamase {ECO:0000313|EMBL:ADO68086.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella aurantiaca (strain DW4/3-1).;"
scnpilot_solids1_trim150_scaffold_1476_curated_10
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7974..8873
DNA (900bp) protein (300aa)
Cytochrome c class I n=1 Tax=Ralstonia pickettii (strain 12D) RepID=C6BBZ9_RALP1
class I cytochrome c
Cytochrome c class I {ECO:0000313|EMBL:ACS61633.1}; Flags: Precursor;; TaxID=428406 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii (strain 12D).;"
scnpilot_solids1_trim150_scaffold_1476_curated_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

9087..9347
DNA (261bp) protein (87aa)
Transglycosylase-associated family protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FZR8_STIAD
Transglycosylase-associated protein {ECO:0000313|EMBL:AHG91953.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
transglycosylase-associated family protein
scnpilot_solids1_trim150_scaffold_1476_curated_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(9459..9833)
DNA (375bp) protein (125aa)
Putative DNA-binding protein HU n=1 Tax=Gordonia namibiensis NBRC 108229 RepID=K6XKT9_9ACTO
Histone family protein DNA-binding protein {ECO:0000313|EMBL:AHG88812.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
DNA-binding protein HU hupB
scnpilot_solids1_trim150_scaffold_1476_curated_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(10023..10571)
DNA (549bp) protein (183aa)
Uncharacterized protein {ECO:0000313|EMBL:AHG87974.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
scnpilot_solids1_trim150_scaffold_1476_curated_14
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(10974..11621)
DNA (648bp) protein (216aa)
Putative outer membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAS9_GEMAT
putative outer membrane protein
Putative outer membrane protein {ECO:0000313|EMBL:BAH39335.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
scnpilot_solids1_trim150_scaffold_1476_curated_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(11835..12668)
DNA (834bp) protein (278aa)
Putative oxidoreductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAT0_GEMAT
Putative oxidoreductase {ECO:0000313|EMBL:AHG91355.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
putative oxidoreductase
scnpilot_solids1_trim150_scaffold_1476_curated_16
unknown

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comp(12665..12832)
DNA (168bp) protein (56aa)

This feature has no annotations

Displaying 16 items

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