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scnpilot_solids1_trim150_scaffold_7072_curated

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_7072_curated_1
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..495)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZH50_AZOL4
Uncharacterized protein {ECO:0000313|EMBL:AKC87756.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_7072_curated_2
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(492..1190)
DNA (699bp) protein (233aa)
Enolase-phosphatase E1 {ECO:0000256|HAMAP-Rule:MF_01681}; EC=3.1.3.77 {ECO:0000256|HAMAP-Rule:MF_01681};; 2,3-diketo-5-methylthio-1-phosphopentane phosphatase {ECO:0000256|HAMAP-Rule:MF_01681}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
haloacid dehalogenase-like hydrolase; K09880 enolase-phosphatase E1 [EC:3.1.3.77]
haloacid dehalogenase n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI00037BAA25
scnpilot_solids1_trim150_scaffold_7072_curated_3
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1187..1744)
DNA (558bp) protein (186aa)
putative oxidase; K08967 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [EC:1.13.11.53 1.13.11.54]
Acireductone dioxygenase {ECO:0000256|HAMAP-Rule:MF_01682, ECO:0000256|SAAS:SAAS00009702}; 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase {ECO:0000256|HAMAP-Rule:MF_01682, ECO:0000256|SAAS:SAAS00090345}; Acireductone dioxygenase (Fe(2+)-requiring) {ECO:0000256|HAMAP-Rule:MF_01682}; Acireductone dioxygenase (Ni(2+)-requiring) {ECO:0000256|HAMAP-Rule:MF_01682}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arsenic
Acireductone dioxygenase id=2555934 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=unknown taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
scnpilot_solids1_trim150_scaffold_7072_curated_4
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1746..2426)
DNA (681bp) protein (227aa)
Methylthioribulose-1-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_01677}; Short=MTRu-1-P dehydratase {ECO:0000256|HAMAP-Rule:MF_01677};; EC=4.2.1.109 {ECO:0000256|HAMAP-Rule:MF_01677};; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
class II aldolase and adducin family protein; K08964 methylthioribulose-1-phosphate dehydratase [EC:4.2.1.109]
Methylthioribulose-1-phosphate dehydratase n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8ZFK3_XANCT
scnpilot_solids1_trim150_scaffold_7072_curated_5
Paracoccus denitrificans, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2596..3297)
DNA (702bp) protein (234aa)
Fis family transcriptional regulator; K01628 L-fuculose-phosphate aldolase [EC:4.1.2.17]
L-fuculose 1-phosphate aldolase {ECO:0000313|EMBL:ABL72659.1}; EC=4.1.2.17 {ECO:0000313|EMBL:ABL72659.1};; TaxID=318586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus denitrificans (strain Pd 1222).;"
L-fuculose 1-phosphate aldolase n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1BAW5_PARDP
scnpilot_solids1_trim150_scaffold_7072_curated_6
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3354..3710)
DNA (357bp) protein (119aa)
Amino acid permease-associated region n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UNA2_PSEUP
amino acid permease; K03294 basic amino acid/polyamine antiporter, APA family
Amino acid permease-associated region {ECO:0000313|EMBL:AER56606.1}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
Displaying 6 items

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