ggKbase home page

scnpilot_solids1_trim150_scaffold_4517_curated

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_4517_curated_1
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(65..1036)
DNA (972bp) protein (324aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5KB14_STEMA
tRNA-i(6)A37 methylthiotransferase; K06168 bifunctional enzyme involved in thiolation and methylation of tRNA
scnpilot_solids1_trim150_scaffold_4517_curated_2
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1094..1465)
DNA (372bp) protein (124aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.
(dimethylallyl)adenosine tRNA methylthiotransferase n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI00037F176D
2-methylthioadenine synthetase; K06168 bifunctional enzyme involved in thiolation and methylation of tRNA
scnpilot_solids1_trim150_scaffold_4517_curated_3
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1605..2501
DNA (897bp) protein (299aa)
Soluble lytic murein transglycosylase n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7URD3_PSEUP
Transglycosylase {ECO:0000313|EMBL:KGM56869.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
soluble lytic murein transglycosylase precursor
scnpilot_solids1_trim150_scaffold_4517_curated_4
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2837..3196
DNA (360bp) protein (120aa)
Ubiquinol-cytochrome c reductase iron-sulfur subunit {ECO:0000256|RuleBase:RU004494}; EC=1.10.2.2 {ECO:0000256|RuleBase:RU004494};; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
Ubiquinol-cytochrome c reductase iron-sulfur subunit n=1 Tax=Rhodanobacter denitrificans RepID=I4WYG0_9GAMM
ubiquinol-cytochrome c reductase, iron-sulfur subunit
scnpilot_solids1_trim150_scaffold_4517_curated_5
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3200..4483
DNA (1284bp) protein (428aa)
Cytochrome b n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WR11_PSEUU
Cytochrome b {ECO:0000256|RuleBase:RU003385}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
cytochrome b/b6 domain; K00412 ubiquinol-cytochrome c reductase cytochrome b subunit
scnpilot_solids1_trim150_scaffold_4517_curated_6
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4476..5219
DNA (744bp) protein (248aa)
Ubiquinol-cytochrome c reductase, cytochrome c1 subunit n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8Z207_XANCT
Ubiquinol cytochrome C oxidoreductase {ECO:0000313|EMBL:KGM55945.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit; K00413 ubiquinol-cytochrome c reductase cytochrome c1 subunit
scnpilot_solids1_trim150_scaffold_4517_curated_7
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5336..5974
DNA (639bp) protein (213aa)
Stringent starvation protein A n=1 Tax=Xanthomonas oryzae pv. oryzicola BLS256 RepID=G7TCL0_9XANT
Stringent starvation protein A {ECO:0000313|EMBL:KGQ18644.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
sspA; stringent starvation protein A; K03599 RNA polymerase-associated protein
scnpilot_solids1_trim150_scaffold_4517_curated_8
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5974..6318
DNA (345bp) protein (115aa)
peptidase n=3 Tax=Xanthomonas axonopodis RepID=UPI0002ECAD3B
Uncharacterized protein {ECO:0000313|EMBL:KGM55947.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
sspB; ClpXP protease specificity-enhancing factor; K03600 stringent starvation protein B
Displaying 8 items

View Taxonomy