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scnpilot_solids1_trim150_scaffold_48_curated

Search features with annotation key words

Displaying items 1-30 of 137 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_48_curated_1
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(113..337)
DNA (225bp) protein (75aa)
alcohol dehydrogenase n=1 Tax=Microbacterium barkeri RepID=UPI0002D955C7
hypothetical protein
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids1_trim150_scaffold_48_curated_2
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

410..847
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5K7R6_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KDA06627.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_48_curated_3
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(880..2265)
DNA (1386bp) protein (462aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0003042763
Uncharacterized protein {ECO:0000313|EMBL:KJL28391.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
large extracellular alpha-helical protein
scnpilot_solids1_trim150_scaffold_48_curated_4
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2262..5225)
DNA (2964bp) protein (988aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KKJ1_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EQM76998.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
glycosyltransferase
scnpilot_solids1_trim150_scaffold_48_curated_5
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5331..5648)
DNA (318bp) protein (106aa)
transcription factor WhiB n=1 Tax=Microbacterium barkeri RepID=UPI0003172EF4
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
WhiB family transcriptional regulator
scnpilot_solids1_trim150_scaffold_48_curated_6
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5810..6928)
DNA (1119bp) protein (373aa)
phosphomannose isomerase; K01809 mannose-6-phosphate isomerase [EC:5.3.1.8]
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KMI5_9MICO
Phosphoheptose isomerase {ECO:0000313|EMBL:KDA06624.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
scnpilot_solids1_trim150_scaffold_48_curated_7
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6999..8417
DNA (1419bp) protein (473aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KHI9_9MICO
O-Antigen ligase {ECO:0000313|EMBL:KJQ53677.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
lipid A core - O-antigen ligase
scnpilot_solids1_trim150_scaffold_48_curated_8
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8414..9715
DNA (1302bp) protein (434aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI000319D2DE
Uncharacterized protein {ECO:0000313|EMBL:EQM76995.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
lipid A core - O-antigen ligase
scnpilot_solids1_trim150_scaffold_48_curated_9
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9719..10717)
DNA (999bp) protein (333aa)
UDP-glucose 4-epimerase {ECO:0000313|EMBL:KJQ53675.1}; EC=5.1.3.2 {ECO:0000313|EMBL:KJQ53675.1};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
UDP-glucose 4-epimerase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2]
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI00030936F2
scnpilot_solids1_trim150_scaffold_48_curated_10
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10784..12694
DNA (1911bp) protein (637aa)
Galactofuranosyl transferase GlfT2 {ECO:0000313|EMBL:KJL28398.1}; EC=2.4.1.288 {ECO:0000313|EMBL:KJL28398.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
glycosyl transferase n=1 Tax=Microbacterium barkeri RepID=UPI000318AD21
glycosyltransferase
scnpilot_solids1_trim150_scaffold_48_curated_11
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12691..13647
DNA (957bp) protein (319aa)
glycosyl transferase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003481792
Glycosyl transferase {ECO:0000313|EMBL:KDA06621.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
glycosyltransferase
scnpilot_solids1_trim150_scaffold_48_curated_12
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13647..14261
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003494B6F
Uncharacterized protein {ECO:0000313|EMBL:KJL28400.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
scnpilot_solids1_trim150_scaffold_48_curated_13
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(14269..15006)
DNA (738bp) protein (246aa)
Sugar ABC transporter n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KHI2_9MICO
polysaccharide/polyol phosphate ABC transporter ATPase; K09691 lipopolysaccharide transport system ATP-binding protein
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids1_trim150_scaffold_48_curated_14
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15006..15824)
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI00031AD248
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
polysaccharide/polyol phosphate ABC transporter permease; K09690 lipopolysaccharide transport system permease protein
scnpilot_solids1_trim150_scaffold_48_curated_15
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15832..16989)
DNA (1158bp) protein (386aa)
glf; UDP-galactopyranose mutase; K01854 UDP-galactopyranose mutase [EC:5.4.99.9]
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI00030AF5FD
Contig_38, whole genome shotgun sequence {ECO:0000313|EMBL:KIP88387.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
scnpilot_solids1_trim150_scaffold_48_curated_16
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17062..18357)
DNA (1296bp) protein (432aa)
UDP-N-acetyl-D-glucosamine 6-dehydrogenase {ECO:0000313|EMBL:KJL34479.1}; EC=1.1.1.136 {ECO:0000313|EMBL:KJL34479.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
nucleotide sugar dehydrogenase n=1 Tax=Agromyces italicus RepID=UPI0003B3C694
nucleotide sugar dehydrogenase
scnpilot_solids1_trim150_scaffold_48_curated_17
Leucobacter sp. UCD-THU, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18417..19550
DNA (1134bp) protein (378aa)
hypothetical protein n=1 Tax=Leucobacter sp. UCD-THU RepID=UPI00035D189B
Acyltransferase {ECO:0000313|EMBL:EYT54092.1}; TaxID=1292023 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter sp. UCD-THU.;"
acyltransferase 3
scnpilot_solids1_trim150_scaffold_48_curated_18
Knoellia sinensis, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19529..20743)
DNA (1215bp) protein (405aa)
hypothetical protein n=1 Tax=Leucobacter salsicius RepID=UPI00037A924F
Uncharacterized protein {ECO:0000313|EMBL:KGN32408.1}; TaxID=1385520 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia sinensis KCTC 19936.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_48_curated_19
Bacillus sp. EGD-AK10, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20745..21824)
DNA (1080bp) protein (360aa)
UDP-N-acetylglucosamine 2-epimerase; K01791 UDP-N-acetylglucosamine 2-epimerase [EC:5.1.3.14]
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Agromyces italicus RepID=UPI0003B5EE66
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:ERI40919.1}; TaxID=1386080 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. EGD-AK10.;"
scnpilot_solids1_trim150_scaffold_48_curated_20
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21850..22905)
DNA (1056bp) protein (352aa)
glycosyl transferase family 2 protein n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI000288E3B4
Glycosyl transferase family 2 {ECO:0000313|EMBL:KJQ53660.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
glycosyl transferase family 2 protein
scnpilot_solids1_trim150_scaffold_48_curated_21
Leucobacter sp. UCD-THU, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22895..24163)
DNA (1269bp) protein (423aa)
hypothetical protein n=1 Tax=Agromyces subbeticus RepID=UPI0003B4758D
Uncharacterized protein {ECO:0000313|EMBL:EYT54150.1}; TaxID=1292023 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter sp. UCD-THU.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_48_curated_22
Leucobacter komagatae, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24160..25287)
DNA (1128bp) protein (376aa)
glycosyltransferase n=1 Tax=Ornithinimicrobium pekingense RepID=UPI0003B56D1D
Leucobacter komagatae strain VKM ST2845 L_komagatae_20, whole genome shotgun sequence {ECO:0000313|EMBL:KIP51858.1}; TaxID=55969 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter komagatae.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_48_curated_23
Arthrobacter sp. PAMC25486, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25299..26387)
DNA (1089bp) protein (363aa)
glycosyl transferase n=1 Tax=Ruania albidiflava RepID=UPI0003B3D732
Uncharacterized protein {ECO:0000313|EMBL:AIY01248.1}; TaxID=1494608 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. PAMC25486.;"
glycosyl transferase family 2 protein
scnpilot_solids1_trim150_scaffold_48_curated_24
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26384..28165)
DNA (1782bp) protein (594aa)
ATP-binding protein of ABC transporter n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AI44_9ACTN
ATP-binding protein of ABC transporter {ECO:0000313|EMBL:EAR24819.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
bacteriocin/lantibiotic ABC transporter/glycine peptidase domain-containing protein
scnpilot_solids1_trim150_scaffold_48_curated_25
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(28162..29151)
DNA (990bp) protein (330aa)
NAD-dependent dehydrogenase n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AI46_9ACTN
dehydrogenase
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids1_trim150_scaffold_48_curated_26
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29151..30248)
DNA (1098bp) protein (366aa)
UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase {ECO:0000313|EMBL:KJQ53656.1}; EC=2.6.1.87 {ECO:0000313|EMBL:KJQ53656.1};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
PLP-dependent enzyme possibly involved in cellwall biogenesis n=1 Tax=Microbacterium sp. TS-1 RepID=U2YYT4_9MICO
PLP-dependent enzyme possibly involved in cell wall biogenesis
scnpilot_solids1_trim150_scaffold_48_curated_27
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30245..30856)
DNA (612bp) protein (204aa)
UDP-2-acetamido-3-amino-2, 3-dideoxy-D-glucuronate N-acetyltransferase {ECO:0000313|EMBL:KJQ53655.1}; EC=2.3.1.201 {ECO:0000313|EMBL:KJQ53655.1};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000376B822
putative acetyltransferase
scnpilot_solids1_trim150_scaffold_48_curated_28
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(30853..32085)
DNA (1233bp) protein (411aa)
glycosyltransferase family 1 n=1 Tax=Agromyces italicus RepID=UPI0003B57A76
glycosyltransferase
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids1_trim150_scaffold_48_curated_29
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32082..32492)
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Humibacter albus RepID=UPI0003B49E36
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGW40720.1}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;"
scnpilot_solids1_trim150_scaffold_48_curated_30
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32489..33241)
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI00036B8DF3
dolichyl-phosphate mannose synthase
Uncharacterized protein {ECO:0000313|EMBL:AGW40721.1}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;"
Displaying items 1-30 of 137 in total

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