ggKbase | organisms

Consensus taxonomy: Microbacterium → Actinomycetales → Actinobacteridae → Actinobacteria → Bacteria

Metagenomic Context

Parent: SCNPILOT_SOLID_1_TRIM150_UNK Manually curated genome
Original version: SCNPILOT_SOLID_1_TRIM150_Micrococcales_69_5

Properties

Avg. coverage: 1.00 Longest contig: 8.49 Kbp Bin length: 1.84 Mbp GC content: 68.98 %

Contigs count: 1001 Features count: 2511 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 24 / 55 BSCG 24 / 51 MC: 2 ASCG 8 / 38

Displaying items 601-650 of 1001 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
scnpilot_solids1_trim150_scaffold_36692_curated Species: Arthrobacter phenanthrenivorans (100%)	2	1136 bp	67.43	1.00	100.09
scnpilot_solids1_trim150_scaffold_40923_curated Species: Arthrobacter phenanthrenivorans (100%)	2	445 bp	64.72	1.00	99.10
scnpilot_solids1_trim150_scaffold_20892_curated Species: Microbacterium oleivorans (50%)	2	1635 bp	71.07	1.00	94.68
scnpilot_solids1_trim150_scaffold_38141_curated Species: Arthrobacter chlorophenolicus (100%)	2	1102 bp	70.51	1.00	101.27
scnpilot_solids1_trim150_scaffold_35306_curated Species: Arthrobacter chlorophenolicus (50%)	2	1166 bp	68.35	1.00	89.28
scnpilot_solids1_trim150_scaffold_32181_curated Species: Microbacterium laevaniformans (50%)	2	1247 bp	72.25	1.00	69.05
scnpilot_solids1_trim150_scaffold_31133_curated Species: Microbacterium sp. CH12i (50%)	2	1060 bp	66.51	1.00	64.53
scnpilot_solids1_trim150_scaffold_23588_curated Species: Arthrobacter sp. FB24 (100%)	2	1476 bp	53.86	1.00	33.54
scnpilot_solids1_trim150_scaffold_27165_curated Species: Arthrobacter phenanthrenivorans (100%)	2	1412 bp	68.70	1.00	99.22
scnpilot_solids1_trim150_scaffold_18982_curated Species: Microbacterium testaceum (50%)	2	1774 bp	68.71	1.00	100.11
scnpilot_solids1_trim150_scaffold_28344_curated Species: Microbacterium ginsengisoli (50%)	2	1369 bp	70.27	1.00	88.09
scnpilot_solids1_trim150_scaffold_29915_curated Species: Arthrobacter phenanthrenivorans (100%)	2	1265 bp	69.17	1.00	100.08
scnpilot_solids1_trim150_scaffold_40989_curated Species: Arthrobacter phenanthrenivorans (100%)	2	1023 bp	66.86	1.00	93.26
scnpilot_solids1_trim150_scaffold_32187_curated Species: Microbacterium mangrovi (50%)	2	1248 bp	70.27	1.00	102.40
scnpilot_solids1_trim150_scaffold_22827_curated Species: Microbacterium sp. TS-1 (50%)	2	1570 bp	69.49	1.00	99.36
scnpilot_solids1_trim150_scaffold_32586_curated Species: Arthrobacter siccitolerans (50%)	2	1237 bp	66.86	1.00	86.82
scnpilot_solids1_trim150_scaffold_9543_curated Species: Microbacterium sp. TS-1 (50%)	2	2984 bp	67.53	1.00	79.52
scnpilot_solids1_trim150_scaffold_26269_curated Species: Arthrobacter phenanthrenivorans (100%)	2	1400 bp	67.21	1.00	83.14
scnpilot_solids1_trim150_scaffold_24797_curated Species: Arthrobacter phenanthrenivorans (100%)	2	1093 bp	67.43	1.00	97.99
scnpilot_solids1_trim150_scaffold_29654_curated Species: Microbacterium azadirachtae (50%)	2	1315 bp	70.19	1.00	99.70
scnpilot_solids1_trim150_scaffold_20887_curated Species: Sinomonas sp. MUSC 117 (50%)	2	1703 bp	67.59	1.00	93.89
scnpilot_solids1_trim150_scaffold_27756_curated Species: Xylanimonas cellulosilytica (100%)	2	1183 bp	66.19	1.00	95.35
scnpilot_solids1_trim150_scaffold_32348_curated Species: Arthrobacter phenanthrenivorans (100%)	2	1229 bp	68.43	1.00	94.96
scnpilot_solids1_trim150_scaffold_39992_curated Species: Arthrobacter phenanthrenivorans (100%)	2	1064 bp	67.76	1.00	96.71
scnpilot_solids1_trim150_scaffold_37594_curated Species: Microbacterium mangrovi (50%)	2	1115 bp	70.94	1.00	96.32
scnpilot_solids1_trim150_scaffold_17444_curated Species: Microbacterium mangrovi (50%)	2	2561 bp	68.33	1.00	73.80
scnpilot_solids1_trim150_scaffold_28908_curated Species: Leifsonia aquatica (50%)	2	1229 bp	73.07	1.00	92.76
scnpilot_solids1_trim150_scaffold_26742_curated Species: Arthrobacter sp. FB24 (100%)	2	1429 bp	71.94	1.00	100.14
scnpilot_solids1_trim150_scaffold_27588_curated Species: Microbacterium laevaniformans (50%)	2	1385 bp	62.24	1.00	57.40
scnpilot_solids1_trim150_scaffold_41874_curated Species: Leifsonia aquatica (50%)	2	904 bp	62.72	1.00	81.97
scnpilot_solids1_trim150_scaffold_40006_curated Species: Microbacterium testaceum (50%)	2	1064 bp	69.45	1.00	44.55
scnpilot_solids1_trim150_scaffold_38015_curated Species: Microbacterium mangrovi (50%)	2	1105 bp	69.77	1.00	96.11
scnpilot_solids1_trim150_scaffold_23316_curated Species: Arthrobacter nitrophenolicus (50%)	2	1454 bp	67.95	1.00	96.77
scnpilot_solids1_trim150_scaffold_9424_curated Species: Leucobacter sp. UCD-THU (50%)	2	2659 bp	67.54	1.00	95.79
scnpilot_solids1_trim150_scaffold_37692_curated Species: Intrasporangium chromatireducens (50%)	2	1093 bp	67.61	1.00	90.58
scnpilot_solids1_trim150_scaffold_25371_curated Species: Microbacterium mangrovi (50%)	2	1468 bp	70.30	1.00	91.76
scnpilot_solids1_trim150_scaffold_28061_curated Species: Cellulomonas fimi (50%)	2	1354 bp	73.12	1.00	93.72
scnpilot_solids1_trim150_scaffold_33853_curated Species: Rothia dentocariosa (50%)	2	979 bp	56.89	1.00	56.69
scnpilot_solids1_trim150_scaffold_17565_curated Species: Microbacterium mangrovi (50%)	2	1924 bp	69.33	1.00	98.70
scnpilot_solids1_trim150_scaffold_90880_curated Species: Microbacterium sp. SA39 (50%)	2	1088 bp	69.67	1.00	91.82
scnpilot_solids1_trim150_scaffold_29382_curated Species: Microbacterium mangrovi (50%)	2	1334 bp	72.86	1.00	99.18
scnpilot_solids1_trim150_scaffold_28418_curated Species: Microbacterium mangrovi (50%)	2	1366 bp	72.40	1.00	87.85
scnpilot_solids1_trim150_scaffold_13806_curated Species: Microbacterium mangrovi (50%)	2	2271 bp	68.21	1.00	88.90
scnpilot_solids1_trim150_scaffold_19457_curated Species: Microbacterium hominis (50%)	2	1792 bp	72.66	1.00	89.23
scnpilot_solids1_trim150_scaffold_37755_curated Species: Microbacterium sp. TS-1 (50%)	2	1111 bp	68.50	1.00	87.22
scnpilot_solids1_trim150_scaffold_10325_curated Species: Arthrobacter phenanthrenivorans (100%)	2	2461 bp	67.45	1.00	81.92
scnpilot_solids1_trim150_scaffold_31349_curated Species: Microbacterium mangrovi (100%)	2	1273 bp	70.78	1.00	99.69
scnpilot_solids1_trim150_scaffold_24925_curated Species: Arthrobacter phenanthrenivorans (100%)	2	1502 bp	70.17	1.00	90.68
scnpilot_solids1_trim150_scaffold_37294_curated Species: Microbacterium sp. CH12i (50%)	2	1106 bp	69.26	1.00	99.28
scnpilot_solids1_trim150_scaffold_29704_curated Species: Microbacterium mangrovi (50%)	2	1264 bp	68.43	1.00	94.22

Displaying items 601-650 of 1001 in total

solids_Micrococcales_1

SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_1

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

solids_Micrococcales_1

SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_1

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

Processing

Terms of Service

Search Help