ggKbase | organisms

Consensus taxonomy: Microbacterium → Actinomycetales → Actinobacteridae → Actinobacteria → Bacteria

Metagenomic Context

Parent: SCNPILOT_SOLID_1_TRIM150_UNK Manually curated genome
Original version: SCNPILOT_SOLID_1_TRIM150_Micrococcales_69_5

Properties

Avg. coverage: 1.00 Longest contig: 8.49 Kbp Bin length: 1.84 Mbp GC content: 68.98 %

Contigs count: 1001 Features count: 2511 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 24 / 55 BSCG 24 / 51 MC: 2 ASCG 8 / 38

Displaying items 551-600 of 1001 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
scnpilot_solids1_trim150_scaffold_22075_curated Species: Microbacterium sp. MRS-1 (50%)	2	1588 bp	71.16	1.00	92.76
scnpilot_solids1_trim150_scaffold_23241_curated Species: Microbacterium ginsengisoli (50%)	2	1579 bp	69.66	1.00	94.62
scnpilot_solids1_trim150_scaffold_15320_curated Species: Microbacterium sp. TS-1 (50%)	2	2125 bp	68.66	1.00	69.18
scnpilot_solids1_trim150_scaffold_11252_curated Species: Aromatoleum aromaticum (50%)	2	2648 bp	66.77	1.00	68.20
scnpilot_solids1_trim150_scaffold_37338_curated Species: Arthrobacter phenanthrenivorans (50%)	2	1121 bp	67.44	1.00	99.55
scnpilot_solids1_trim150_scaffold_38018_curated Species: Microbacterium oleivorans (50%)	2	1025 bp	70.93	1.00	96.88
scnpilot_solids1_trim150_scaffold_25912_curated Species: Arthrobacter phenanthrenivorans (100%)	2	1462 bp	65.60	1.00	94.80
scnpilot_solids1_trim150_scaffold_11316_curated Species: Microbacterium sp. SA39 (50%)	2	2637 bp	73.23	1.00	94.20
scnpilot_solids1_trim150_scaffold_12420_curated Species: Microbacterium hominis (50%)	2	2473 bp	69.87	1.00	37.48
scnpilot_solids1_trim150_scaffold_40665_curated Species: Microbacterium sp. C448 (50%)	2	1052 bp	69.77	1.00	100.10
scnpilot_solids1_trim150_scaffold_38011_curated Species: Microbacterium mangrovi (50%)	2	1076 bp	71.10	1.00	100.37
scnpilot_solids1_trim150_scaffold_23360_curated Species: Arthrobacter phenanthrenivorans (100%)	2	1576 bp	68.72	1.00	98.03
scnpilot_solids1_trim150_scaffold_34143_curated Species: Microbacterium maritypicum (50%)	2	1156 bp	71.11	1.00	93.17
scnpilot_solids1_trim150_scaffold_23199_curated Species: Microbacterium mangrovi (100%)	2	1583 bp	72.96	1.00	96.27
scnpilot_solids1_trim150_scaffold_18424_curated Species: Microbacterium ginsengisoli (50%)	2	1860 bp	66.40	1.00	89.84
scnpilot_solids1_trim150_scaffold_35792_curated Species: Microbacterium sp. UCD-TDU (50%)	2	1155 bp	68.40	1.00	90.91
scnpilot_solids1_trim150_scaffold_22673_curated Species: Arthrobacter phenanthrenivorans (100%)	2	1498 bp	67.42	1.00	93.12
scnpilot_solids1_trim150_scaffold_38307_curated Species: Arthrobacter nicotinovorans (50%)	2	1099 bp	67.33	1.00	79.98
scnpilot_solids1_trim150_scaffold_30332_curated Species: Arthrobacter phenanthrenivorans (50%)	2	1304 bp	67.71	1.00	87.19
scnpilot_solids1_trim150_scaffold_24620_curated Species: Arthrobacter phenanthrenivorans (100%)	2	1454 bp	69.94	1.00	100.28
scnpilot_solids1_trim150_scaffold_30787_curated Species: Cellulomonas flavigena (50%)	2	1284 bp	72.35	1.00	93.22
scnpilot_solids1_trim150_scaffold_36398_curated Species: Microbacterium testaceum (50%)	2	1153 bp	70.77	1.00	93.41
scnpilot_solids1_trim150_scaffold_15657_curated Species: Microbacterium mangrovi (100%)	2	2092 bp	68.55	1.00	100.10
scnpilot_solids1_trim150_scaffold_38853_curated Species: Beutenbergia cavernae (50%)	2	1042 bp	69.48	1.00	96.45
scnpilot_solids1_trim150_scaffold_21774_curated Species: Microbacterium mangrovi (100%)	2	1412 bp	68.48	1.00	99.86
scnpilot_solids1_trim150_scaffold_42681_curated Species: Microbacterium azadirachtae (50%)	2	1014 bp	69.63	1.00	81.07
scnpilot_solids1_trim150_scaffold_29549_curated Species: Microbacterium ginsengisoli (50%)	2	1329 bp	70.13	1.00	93.91
scnpilot_solids1_trim150_scaffold_21547_curated Species: Micrococcus luteus (50%)	2	1667 bp	70.55	1.00	82.96
scnpilot_solids1_trim150_scaffold_33354_curated Species: Microbacterium testaceum (50%)	2	1139 bp	71.03	1.00	92.45
scnpilot_solids1_trim150_scaffold_7934_curated Species: Microbacterium mangrovi (50%)	2	3385 bp	71.67	1.00	100.06
scnpilot_solids1_trim150_scaffold_16906_curated Species: Leifsonia xyli (50%)	2	1921 bp	67.41	1.00	100.42
scnpilot_solids1_trim150_scaffold_25663_curated Species: Arthrobacter phenanthrenivorans (100%)	2	1275 bp	66.75	1.00	89.18
scnpilot_solids1_trim150_scaffold_16454_curated Species: Microbacterium azadirachtae (50%)	2	2028 bp	70.22	1.00	100.15
scnpilot_solids1_trim150_scaffold_34633_curated Species: Arthrobacter phenanthrenivorans (100%)	2	940 bp	70.96	1.00	100.53
scnpilot_solids1_trim150_scaffold_31459_curated Species: Microbacterium sp. MRS-1 (50%)	2	1053 bp	66.86	1.00	82.62
scnpilot_solids1_trim150_scaffold_39000_curated Species: Arthrobacter phenanthrenivorans (100%)	2	733 bp	68.21	1.00	82.67
scnpilot_solids1_trim150_scaffold_26623_curated Species: Leifsonia aquatica (50%)	2	1433 bp	70.13	1.00	97.35
scnpilot_solids1_trim150_scaffold_20564_curated Species: Arthrobacter phenanthrenivorans (100%)	2	1724 bp	68.27	1.00	83.70
scnpilot_solids1_trim150_scaffold_36482_curated Species: Microbacterium testaceum (50%)	2	1703 bp	67.41	1.00	75.75
scnpilot_solids1_trim150_scaffold_36698_curated Species: Microbacterium azadirachtae (50%)	2	1008 bp	68.85	1.00	72.92
scnpilot_solids1_trim150_scaffold_23396_curated Species: Microbacterium oleivorans (50%)	2	1574 bp	71.16	1.00	91.11
scnpilot_solids1_trim150_scaffold_18917_curated Species: Microbacterium oleivorans (50%)	2	1827 bp	69.35	1.00	88.01
scnpilot_solids1_trim150_scaffold_28663_curated Species: Nocardioides sp. CF8 (50%)	2	1357 bp	61.61	1.00	73.40
scnpilot_solids1_trim150_scaffold_29015_curated Species: Microbacterium sp. oral taxon 186 (50%)	2	1059 bp	68.84	1.00	100.28
scnpilot_solids1_trim150_scaffold_38020_curated Species: Microbacterium ginsengisoli (50%)	2	681 bp	67.69	1.00	96.04
scnpilot_solids1_trim150_scaffold_30628_curated Species: Microbacterium mangrovi (50%)	2	1227 bp	71.80	1.00	99.27
scnpilot_solids1_trim150_scaffold_12947_curated Species: Microbacterium ginsengisoli (50%)	2	2277 bp	68.42	1.00	90.51
scnpilot_solids1_trim150_scaffold_33986_curated Species: Microbacterium testaceum (50%)	2	1200 bp	67.42	1.00	97.50
scnpilot_solids1_trim150_scaffold_10478_curated Species: Microbacterium sp. TS-1 (50%)	2	2791 bp	70.83	1.00	91.58
scnpilot_solids1_trim150_scaffold_25271_curated Species: Microbacterium mangrovi (50%)	2	1488 bp	71.77	1.00	100.20

Displaying items 551-600 of 1001 in total

solids_Micrococcales_1

SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_1

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

solids_Micrococcales_1

SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_1

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

Processing

Terms of Service

Search Help