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scnpilot_solids1_trim150_scaffold_211_curated

Search features with annotation key words

Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_211_curated_1
Burkholderia cenocepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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77..472
DNA (396bp) protein (132aa)
Phage terminase, small subunit, , P27 family n=1 Tax=Burkholderia cenocepacia (strain MC0-3) RepID=B1JZH0_BURCC
P27 family phage terminase small subunit
Phage terminase, small subunit, , P27 family {ECO:0000313|EMBL:ACA90463.1}; TaxID=406425 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cenocepacia (strain MC0-3).;"
scnpilot_solids1_trim150_scaffold_211_curated_2
Burkholderia cenocepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

441..2006
DNA (1566bp) protein (522aa)
Terminase n=1 Tax=Burkholderia cenocepacia (strain MC0-3) RepID=B1JZH1_BURCC
terminase
Terminase {ECO:0000313|EMBL:ACA90464.1}; TaxID=406425 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cenocepacia (strain MC0-3).;"
scnpilot_solids1_trim150_scaffold_211_curated_3
unknown

Not on your lists

comp(1836..2210)
DNA (375bp) protein (125aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_211_curated_4
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2519..2809)
DNA (291bp) protein (97aa)
Transposase IS4 family n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q81ZL5_NITEU
IS4 family transposase
Transposase IS4 family {ECO:0000313|EMBL:CAD85433.1}; TaxID=228410 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298).;"
scnpilot_solids1_trim150_scaffold_211_curated_5
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2809..3291)
DNA (483bp) protein (161aa)
Possible transposase n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82UD8_NITEU
transposase
Possible transposase {ECO:0000313|EMBL:CAD85464.1}; TaxID=228410 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298).;"
scnpilot_solids1_trim150_scaffold_211_curated_6
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3866..4882)
DNA (1017bp) protein (339aa)
ornithine cyclodeaminase (EC:4.3.1.12); K01750 ornithine cyclodeaminase [EC:4.3.1.12]
Ornithine cyclodeaminase n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y7V6_LEPCP
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
scnpilot_solids1_trim150_scaffold_211_curated_7
RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5264..5506
DNA (243bp) protein (81aa)
cell filamentation protein Fic n=1 Tax=Uliginosibacterium gangwonense RepID=UPI000379219B
hypothetical protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated
scnpilot_solids1_trim150_scaffold_211_curated_8
unknown

Not on your lists

5549..5686
DNA (138bp) protein (46aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_211_curated_9
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

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5720..8359
DNA (2640bp) protein (880aa)
Predicted helicase n=1 Tax=gamma proteobacterium HdN1 RepID=E1VM54_9GAMM
helicase
Predicted helicase {ECO:0000313|EMBL:CBL45896.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
scnpilot_solids1_trim150_scaffold_211_curated_10
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8364..9296
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VM53_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL45895.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
scnpilot_solids1_trim150_scaffold_211_curated_11
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9383..10117)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y8E6_NITMU
Uncharacterized protein {ECO:0000313|EMBL:ABB74975.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_211_curated_12
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10482..10988
DNA (507bp) protein (169aa)
RelB protein n=1 Tax=Thauera sp. 28 RepID=N6ZFN5_9RHOO
RelB protein
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
scnpilot_solids1_trim150_scaffold_211_curated_13
R_Methylophilales_57_10, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10972..11241
DNA (270bp) protein (90aa)
Poison n=1 Tax=uncultured bacterium RepID=K1YY41_9BACT
putative toxin
Tax=RIFCSPHIGHO2_02_FULL_Methylophilales_57_10_curated
scnpilot_solids1_trim150_scaffold_211_curated_14
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11417..12616
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCS2_NITMU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB73449.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_211_curated_15
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13176..15296)
DNA (2121bp) protein (707aa)
ATP-dependent endonuclease of the OLD family-like protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCR9_NITMU
ATP-dependent endonuclease of the OLD family-like protein {ECO:0000313|EMBL:ABB73452.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
ATP-dependent OLD family endonuclease
scnpilot_solids1_trim150_scaffold_211_curated_16
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15526..15969)
DNA (444bp) protein (148aa)
Cytidine/deoxycytidylate deaminase, zinc-binding region n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCR8_NITMU
cytidine/deoxycytidylate deaminase zinc-binding subunit
Cytidine/deoxycytidylate deaminase, zinc-binding region {ECO:0000313|EMBL:ABB73453.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_211_curated_17
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16058..16792)
DNA (735bp) protein (245aa)
GCN5-related N-acetyltransferase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCR7_NITMU
GCN5-like N-acetyltransferase
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ABB73454.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_211_curated_18
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17080..17835
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCR6_NITMU
hypothetical protein; K09122 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB73455.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_211_curated_19
unknown

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comp(18502..18675)
DNA (174bp) protein (58aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_211_curated_20
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18799..19887)
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XAT0_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD42367.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_211_curated_21
Aurantimonas manganoxydans, Aurantimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20478..22247)
DNA (1770bp) protein (590aa)
Uncharacterized protein n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YK57_MOBAS
Uncharacterized protein {ECO:0000313|EMBL:EAS50666.1}; TaxID=287752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aurantimonas.;" source="Manganese-oxidizing bacterium (strain SI85-9A1).;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_211_curated_22
Burkholderia jiangsuensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22525..22812
DNA (288bp) protein (96aa)
transposase ISRSO6 n=1 Tax=Burkholderia bryophila RepID=UPI00037CE002
Transposase {ECO:0000313|EMBL:KAK42489.1}; TaxID=1458357 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia jiangsuensis.;"
transposase
scnpilot_solids1_trim150_scaffold_211_curated_23
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22852..23292)
DNA (441bp) protein (147aa)
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
scnpilot_solids1_trim150_scaffold_211_curated_24
Burkholderia oklahomensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23323..24189)
DNA (867bp) protein (289aa)
exonuclease-like protein; K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7]
transposase n=2 Tax=Burkholderia oklahomensis RepID=UPI00016A85D0
Exonuclease family protein {ECO:0000313|EMBL:AIO66534.1}; TaxID=342113 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia oklahomensis.;"
scnpilot_solids1_trim150_scaffold_211_curated_25
unknown

Not on your lists

comp(24231..24638)
DNA (408bp) protein (136aa)
transcriptional regulator
scnpilot_solids1_trim150_scaffold_211_curated_26
unknown

Not on your lists

comp(24982..25974)
DNA (993bp) protein (331aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_211_curated_27
Methylophaga thiooxydans, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26106..26492
DNA (387bp) protein (129aa)
TolA protein {ECO:0000313|EMBL:KGM07592.1}; TaxID=392484 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Methylophaga.;" source="Methylophaga thiooxydans.;"
scnpilot_solids1_trim150_scaffold_211_curated_28
unknown

Not on your lists

26529..26774
DNA (246bp) protein (82aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_211_curated_29
Methyloglobulus morosus, Methyloglobulus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26762..27148
DNA (387bp) protein (129aa)
Putative ribonuclease VapC {ECO:0000313|EMBL:ESS67087.1}; EC=3.1.-.- {ECO:0000313|EMBL:ESS67087.1};; TaxID=1116472 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methyloglobulus.;" source="Methyloglobulus morosus KoM1.;"
Putative ribonuclease VapC n=1 Tax=Methyloglobulus morosus KoM1 RepID=V5BLS4_9GAMM
toxin-antitoxin system PIN domain-containing protein
scnpilot_solids1_trim150_scaffold_211_curated_30
Phaeospirillum molischianum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27238..27789
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FP65_PHAMO
Uncharacterized protein {ECO:0000313|EMBL:CCG40153.1}; TaxID=1150626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum molischianum DSM 120.;"
hypothetical protein
Displaying items 1-30 of 58 in total

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