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scnpilot_solids1_trim150_scaffold_29_curated

Search features with annotation key words

Displaying items 1-30 of 194 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_29_curated_1
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..306)
DNA (306bp) protein (102aa)
Phage prohead protease, HK97 family {ECO:0000313|EMBL:EFF76880.1}; EC=3.4.-.- {ECO:0000313|EMBL:EFF76880.1};; TaxID=742159 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter piechaudii ATCC 43553.;"
Phage prohead protease, HK97 family n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4X8L2_9BURK
HK97 family phage prohead protease; K06904
scnpilot_solids1_trim150_scaffold_29_curated_2
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(327..1562)
DNA (1236bp) protein (412aa)
Putative phage-related protein n=1 Tax=Pseudomonas aeruginosa (strain PA7) RepID=A6VBQ1_PSEA7
putative phage-like protein
Putative phage-related protein {ECO:0000313|EMBL:ABR86617.1}; TaxID=381754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa (strain PA7).;"
scnpilot_solids1_trim150_scaffold_29_curated_3
Oxalobacter formigenes, Oxalobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2202..2684)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Oxalobacter formigenes HOxBLS RepID=C3X4R5_OXAFO
Uncharacterized protein {ECO:0000313|EMBL:EEO28201.1}; TaxID=556268 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Oxalobacter.;" source="Oxalobacter formigenes HOxBLS.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_29_curated_4
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2671..2970)
DNA (300bp) protein (100aa)
Uncharacterized protein n=2 Tax=Burkholderia pseudomallei RepID=Q63VU0_BURPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAH35149.1}; TaxID=272560 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia pseudomallei (strain K96243).;"
scnpilot_solids1_trim150_scaffold_29_curated_5
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2960..3184)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DH69_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU62641.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
phage transcriptional regulator
scnpilot_solids1_trim150_scaffold_29_curated_6
unknown

Not on your lists

comp(3539..3961)
DNA (423bp) protein (141aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_29_curated_7
unknown

Not on your lists

comp(4026..4706)
DNA (681bp) protein (227aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_29_curated_8
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4794..5993)
DNA (1200bp) protein (400aa)
Integrase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DTD8_9PROT
Integrase {ECO:0000313|EMBL:CCU62645.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
integrase family protein
scnpilot_solids1_trim150_scaffold_29_curated_9
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6601..6906
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZYU0_9PROT
Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
scnpilot_solids1_trim150_scaffold_29_curated_10
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7119..7613)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9G4_NITMU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB74607.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_29_curated_11
unknown

Not on your lists

comp(7644..7871)
DNA (228bp) protein (76aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_29_curated_12
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8312..8725
DNA (414bp) protein (138aa)
Flagellar transcriptional regulator FlhD n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9G3_NITMU
transcriptional activator FlhD; K02403 flagellar transcriptional activator FlhD
Flagellar transcriptional regulator FlhD {ECO:0000256|HAMAP-Rule:MF_00725, ECO:0000256|SAAS:SAAS00011626}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_29_curated_13
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8804..9352
DNA (549bp) protein (183aa)
Flagellar transcriptional regulator FlhC n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9G2_NITMU
transcriptional activator FlhC; K02402 flagellar transcriptional activator FlhC
Flagellar transcriptional regulator FlhC {ECO:0000256|HAMAP-Rule:MF_01891, ECO:0000256|PIRNR:PIRNR003159}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_29_curated_14
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9726..10586
DNA (861bp) protein (287aa)
Probable chemotaxis (Motility protein A) transmembrane n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9G1_NITMU
chemotaxis (motility protein A) transmembrane; K02556 chemotaxis protein MotA
Probable chemotaxis (Motility protein A) transmembrane {ECO:0000313|EMBL:ABB74610.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_29_curated_15
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10608..11534
DNA (927bp) protein (309aa)
OmpA/MotB n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9G0_NITMU
motB; flagellar motor protein MotB; K02557 chemotaxis protein MotB
OmpA/MotB {ECO:0000313|EMBL:ABB74611.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_29_curated_16
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11831..13009
DNA (1179bp) protein (393aa)
Flagellar biosynthetic protein FlhB n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9F9_NITMU
flhB; flagellar biosynthesis protein FlhB; K02401 flagellar biosynthetic protein FlhB
Flagellar biosynthetic protein FlhB {ECO:0000313|EMBL:ABB74612.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_29_curated_17
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13012..15090
DNA (2079bp) protein (693aa)
Flagellar biosynthesis protein FlhA n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9F8_NITMU
flagellar biosynthesis protein FlhA; K02400 flagellar biosynthesis protein FlhA
Flagellar biosynthesis protein FlhA {ECO:0000313|EMBL:ABB74613.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_29_curated_18
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15087..16769
DNA (1683bp) protein (561aa)
GTP-binding signal recognition particle SRP54, G-domain n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9F7_NITMU
flhF; flagellar biosynthesis regulator FlhF; K02404 flagellar biosynthesis protein FlhF
GTP-binding signal recognition particle SRP54, G-domain {ECO:0000313|EMBL:ABB74614.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_29_curated_19
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16717..17655
DNA (939bp) protein (313aa)
Site-determining protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9F6_NITMU
putative MinD-like protein; K04562 flagellar biosynthesis protein FlhG
Putative MinD-related protein {ECO:0000313|EMBL:ABB74615.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_29_curated_20
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17667..18395
DNA (729bp) protein (243aa)
RNA polymerase sigma factor FliA n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9F5_NITMU
sigma 28 (flagella/sporulation); K02405 RNA polymerase sigma factor for flagellar operon FliA
RNA polymerase sigma factor FliA {ECO:0000256|HAMAP-Rule:MF_00962}; RNA polymerase sigma factor for flagellar operon {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma F {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma-28 {ECO:0000256|HAMAP-Rule:MF_00962}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_29_curated_21
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18371..19117
DNA (747bp) protein (249aa)
MotA/TolQ/ExbB proton channel n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9F4_NITMU
motC; flagellar motor protein; K02556 chemotaxis protein MotA
MotA/TolQ/ExbB proton channel {ECO:0000313|EMBL:ABB74617.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_29_curated_22
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19207..20076
DNA (870bp) protein (290aa)
OmpA/MotB n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9F3_NITMU
flagellar motor protein MotD; K02557 chemotaxis protein MotB
OmpA/MotB {ECO:0000313|EMBL:ABB74618.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_29_curated_23
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20387..20857)
DNA (471bp) protein (157aa)
FlgN n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9F2_NITMU
FlgN; K02399 flagella synthesis protein FlgN
FlgN {ECO:0000313|EMBL:ABB74619.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_29_curated_24
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20865..21203)
DNA (339bp) protein (113aa)
Anti-sigma-28 factor, FlgM n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9F1_NITMU
anti-sigma-28 factor FlgM; K02398 negative regulator of flagellin synthesis FlgM
Anti-sigma-28 factor, FlgM {ECO:0000313|EMBL:ABB74620.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_29_curated_25
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21392..22138)
DNA (747bp) protein (249aa)
Flagellar protein FlgA n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9F0_NITMU
flageller protein FlgA; K02386 flagella basal body P-ring formation protein FlgA
Flagella basal body P-ring formation protein FlgA {ECO:0000256|RuleBase:RU362063}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_29_curated_26
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22524..22928
DNA (405bp) protein (135aa)
Flagellar basal body rod protein FlgB n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9E7_NITMU
flagellar basal-body rod protein FlgB; K02387 flagellar basal-body rod protein FlgB
Flagellar basal body rod protein FlgB {ECO:0000256|PIRNR:PIRNR002889}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_29_curated_27
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22943..23362
DNA (420bp) protein (140aa)
Flagellar basal-body rod protein FlgC n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9E6_NITMU
flagellar basal-body rod protein FlgC; K02388 flagellar basal-body rod protein FlgC
Flagellar basal-body rod protein FlgC {ECO:0000256|RuleBase:RU362062}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_29_curated_28
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23372..24040
DNA (669bp) protein (223aa)
Flagellar hook capping protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9E5_NITMU
flgD; flagellar basal body rod modification protein; K02389 flagellar basal-body rod modification protein FlgD
Flagellar hook capping protein {ECO:0000313|EMBL:ABB74626.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_29_curated_29
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24154..25374
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9E4_NITMU
flgE; flagellar hook protein FlgE; K02390 flagellar hook protein FlgE
Uncharacterized protein {ECO:0000313|EMBL:ABB74627.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_29_curated_30
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25405..26157
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9E3_NITMU
flgF; flagellar basal body rod protein FlgF; K02391 flagellar basal-body rod protein FlgF
Uncharacterized protein {ECO:0000313|EMBL:ABB74628.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
Displaying items 1-30 of 194 in total

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