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scnpilot_solids1_trim150_scaffold_4230_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_4230_curated_1
unknown

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comp(1..159)
DNA (159bp) protein (53aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_4230_curated_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(182..412)
DNA (231bp) protein (77aa)
Plasmid replication region DNA-binding N-term n=1 Tax=Rhodanobacter denitrificans RepID=M4NHR7_9GAMM
Plasmid replication region DNA-binding N-term
Plasmid replication region DNA-binding N-term {ECO:0000313|EMBL:AGG89208.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_4230_curated_3
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(563..1087)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIE1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:AHX13333.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_4230_curated_4
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1143..2132)
DNA (990bp) protein (330aa)
Putative cointegrase resolution protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VRW1_9GAMM
Putative cointegrase resolution protein {ECO:0000313|EMBL:EIL89952.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Plasmid replication region DNA-binding N-term
scnpilot_solids1_trim150_scaffold_4230_curated_5

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2290..3480
DNA (1191bp) protein (397aa)
Phage integrase family protein n=4 Tax=mine drainage metagenome RepID=T0Y1N3_9ZZZZ
Phage integrase family protein {ECO:0000313|EMBL:EQD25932.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
site-specific recombinase XerD
scnpilot_solids1_trim150_scaffold_4230_curated_6

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comp(3535..3930)
DNA (396bp) protein (132aa)
Hg(II)-responsive transcriptional regulator (Fragment) n=1 Tax=mine drainage metagenome RepID=T1CFJ4_9ZZZZ
Hg(II)-responsive transcriptional regulator {ECO:0000313|EMBL:EQD64904.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
merR; Mercuric resistance operon regulatory protein
scnpilot_solids1_trim150_scaffold_4230_curated_7

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4006..4356
DNA (351bp) protein (117aa)
Mercuric transport protein (Mercury ion transport protein) n=1 Tax=mine drainage metagenome RepID=E6PN64_9ZZZZ
Mercuric transport protein (Mercury ion transport protein) {ECO:0000313|EMBL:CBH96366.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
MerT mercuric transport protein
scnpilot_solids1_trim150_scaffold_4230_curated_8

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4367..4651
DNA (285bp) protein (95aa)
Mercuric transport protein periplasmic component (Periplasmic mercury ion-binding protein) (Mercury scavenger protein) n=1 Tax=mine drainage metagenome RepID=E6PXT8_9ZZZZ
Mercuric transport protein periplasmic component (Periplasmic mercury ion-binding protein) (Mercury scavenger protein) {ECO:0000313|EMBL:CBH99747.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
merP; Mercuric transport protein periplasmic component precursor (Periplasmic mercury ion-binding protein) (Mercury scavenger protein)
scnpilot_solids1_trim150_scaffold_4230_curated_9
Cupriavidus metallidurans, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4664..5038
DNA (375bp) protein (125aa)
Alkylhydroperoxidase AhpD core n=1 Tax=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) RepID=Q58AN4_RALME
ahpD; alkylhydroperoxidase AhpD
Alkylhydroperoxidase AhpD core {ECO:0000313|EMBL:ABF12852.1}; Uncharacterized protein {ECO:0000313|EMBL:CAI11233.1}; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839).;"
Displaying 9 items

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