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scnpilot_solids1_trim150_scaffold_695_curated

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_695_curated_1
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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44..1042
DNA (999bp) protein (333aa)
DNA-directed RNA polymerase, alpha subunit (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=2 Tax=Rhodanobacter RepID=I4WKT7_9GAMM
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_695_curated_2
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1074..1457
DNA (384bp) protein (128aa)
50S ribosomal protein L17 n=1 Tax=Rhodanobacter sp. 115 RepID=I4WNL3_9GAMM
LSU ribosomal protein L17P
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_695_curated_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1611..2111
DNA (501bp) protein (167aa)
Disulfide bond formation protein B n=1 Tax=Rhodanobacter denitrificans RepID=M4NBX2_9GAMM
disulfide bond formation protein DsbB
Disulfide bond formation protein B {ECO:0000256|HAMAP-Rule:MF_00286}; Disulfide oxidoreductase {ECO:0000256|HAMAP-Rule:MF_00286}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_695_curated_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2143..3543
DNA (1401bp) protein (467aa)
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Rhodanobacter denitrificans RepID=I4WKU0_9GAMM
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000313|EMBL:EIM00184.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
scnpilot_solids1_trim150_scaffold_695_curated_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3527..5170)
DNA (1644bp) protein (548aa)
Amidase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VZ35_9GAMM
Amidase {ECO:0000313|EMBL:EIL92476.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
scnpilot_solids1_trim150_scaffold_695_curated_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5237..5947
DNA (711bp) protein (237aa)
Cytochrome c class I n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WL40_9GAMM
Cytochrome c class I {ECO:0000313|EMBL:EIM00182.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
cytochrome c553
scnpilot_solids1_trim150_scaffold_695_curated_7
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5944..7233
DNA (1290bp) protein (430aa)
Cytochrome c, class I n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VMA0_9GAMM
Cytochrome c, class I {ECO:0000313|EMBL:EIL88341.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
cytochrome c, mono- and diheme variants family
scnpilot_solids1_trim150_scaffold_695_curated_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7249..7935)
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VZ31_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92472.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
PP-loop superfamily ATP-utilizing enzyme
scnpilot_solids1_trim150_scaffold_695_curated_9
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8231..9724
DNA (1494bp) protein (498aa)
Ribonuclease G n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WL36_9GAMM
Ribonuclease G {ECO:0000313|EMBL:EIM00178.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
ribonuclease, Rne/Rng family
scnpilot_solids1_trim150_scaffold_695_curated_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9746..13660
DNA (3915bp) protein (1305aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VZ29_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92470.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
TIGR02099 family protein
scnpilot_solids1_trim150_scaffold_695_curated_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13722..15809)
DNA (2088bp) protein (696aa)
NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1F4_9GAMM
NADH:flavin oxidoreductase/NADH oxidase {ECO:0000313|EMBL:EIL93295.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
NADH:flavin oxidoreductase
scnpilot_solids1_trim150_scaffold_695_curated_12
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15942..17252)
DNA (1311bp) protein (437aa)
Parathion hydrolase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJ85_9GAMM
amidohydrolase, imidazolonepropionase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_695_curated_13
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(17249..18334)
DNA (1086bp) protein (362aa)
Rieske (2Fe-2S) domain-containing protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1F2_9GAMM
Rieske (2Fe-2S) domain-containing protein {ECO:0000313|EMBL:EIL93293.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ring-hydroxylating dioxygenase, large terminal subunit
scnpilot_solids1_trim150_scaffold_695_curated_14
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18592..20610
DNA (2019bp) protein (673aa)
Sulfotransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJ72_9GAMM
Sulfotransferase {ECO:0000313|EMBL:EIL99513.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
sulfotransferase family protein
scnpilot_solids1_trim150_scaffold_695_curated_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20659..23211
DNA (2553bp) protein (851aa)
TonB-dependent receptor n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1F0_9GAMM
TonB-dependent receptor {ECO:0000313|EMBL:EIL93291.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
outer membrane receptor protein
scnpilot_solids1_trim150_scaffold_695_curated_16
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23350..23898)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VKH9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL87720.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_695_curated_17
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23955..25094)
DNA (1140bp) protein (380aa)
Sodium/glutamate symporter n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W596_9GAMM
Sodium/glutamate symporter {ECO:0000313|EMBL:EIL94637.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
gltS; sodium/glutamate symport carrier protein; K03312 glutamate:Na+ symporter, ESS family
Displaying 17 items

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