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scnpilot_solids1_trim150_scaffold_404_curated

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_404_curated_1
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..101
DNA (99bp) protein (33aa)
Protein-export membrane protein SecF n=1 Tax=Rhodanobacter denitrificans RepID=I4WNS6_9GAMM
protein translocase subunit secF
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
scnpilot_solids1_trim150_scaffold_404_curated_2
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(139..846)
DNA (708bp) protein (236aa)
Nucleotidyl transferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WNS7_9GAMM
Nucleoside-diphosphate-sugar pyrophosphorylase family protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_404_curated_3
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(843..1886)
DNA (1044bp) protein (348aa)
Aminoglycoside phosphotransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5F6_9GAMM
aminoglycoside phosphotransferase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_404_curated_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2010..2444
DNA (435bp) protein (145aa)
FeS assembly SUF system regulator, gammaproteobacterial n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5F7_9GAMM
FeS assembly SUF system regulator, gammaproteobacterial {ECO:0000313|EMBL:EIL94698.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
transcriptional regulator, BadM/Rrf2 family
scnpilot_solids1_trim150_scaffold_404_curated_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2492..3967
DNA (1476bp) protein (492aa)
Cysteine desulfurase activator complex subunit SufB n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WEE6_9GAMM
Cysteine desulfurase activator complex subunit SufB {ECO:0000313|EMBL:EIL97837.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Iron-regulated ABC transporter membrane component SufB
scnpilot_solids1_trim150_scaffold_404_curated_6
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4085..4849
DNA (765bp) protein (255aa)
FeS assembly ATPase SufC n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VJG5_9GAMM
FeS assembly ATPase SufC {ECO:0000313|EMBL:EIL87356.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
FeS assembly ATPase SufC
scnpilot_solids1_trim150_scaffold_404_curated_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4846..6147
DNA (1302bp) protein (434aa)
FeS assembly protein SufD n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WEE4_9GAMM
FeS assembly protein SufD {ECO:0000313|EMBL:EIL97835.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Iron-regulated ABC transporter permease protein SufD
scnpilot_solids1_trim150_scaffold_404_curated_8
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6222..7475
DNA (1254bp) protein (418aa)
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
cysteine desulfurase-like protein, SufS subfamily (EC:2.8.1.7)
Cysteine desulfurase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VJG7_9GAMM
scnpilot_solids1_trim150_scaffold_404_curated_9
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7532..8446
DNA (915bp) protein (305aa)
Putative acyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WEE2_9GAMM
Putative acyltransferase {ECO:0000313|EMBL:EIL97833.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
1-acyl-sn-glycerol-3-phosphate acyltransferase
scnpilot_solids1_trim150_scaffold_404_curated_10
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8448..9380
DNA (933bp) protein (311aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
ketopantoate reductase (EC:1.1.1.169)
2-dehydropantoate 2-reductase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VJH4_9GAMM
scnpilot_solids1_trim150_scaffold_404_curated_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9458..10018
DNA (561bp) protein (187aa)
GCN5-like N-acetyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5G4_9GAMM
putative acyltransferase
GCN5-like N-acetyltransferase {ECO:0000313|EMBL:EIL94705.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids1_trim150_scaffold_404_curated_12
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10003..10317
DNA (315bp) protein (105aa)
Ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase n=1 Tax=Rhodanobacter denitrificans RepID=I4WNT8_9GAMM
ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_404_curated_13
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10509..11657)
DNA (1149bp) protein (383aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2E5_9GAMM
N-acetylglucosamine-6-phosphate deacetylase
scnpilot_solids1_trim150_scaffold_404_curated_14
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11657..12733)
DNA (1077bp) protein (359aa)
Glutamine-fructose-6-phosphate transaminase {ECO:0000313|EMBL:CCF66767.1}; EC=2.6.1.16 {ECO:0000313|EMBL:CCF66767.1};; TaxID=1085630 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv. punicae str. LMG 859.;"
glmS; glucosamine-6-phosphate deaminase (EC:3.5.99.6); K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16]
Glutamine-fructose-6-phosphate transaminase n=3 Tax=Xanthomonas axonopodis RepID=H1XC37_9XANT
scnpilot_solids1_trim150_scaffold_404_curated_15
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12730..13761)
DNA (1032bp) protein (344aa)
LacI family transcription regulator n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00035EBD41
LacI family transcriptional regulator {ECO:0000313|EMBL:KGI77569.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
putative LacI family transcriptional regulator; K02529 LacI family transcriptional regulator
scnpilot_solids1_trim150_scaffold_404_curated_16
Salinisphaera hydrothermalis, Salinisphaera, Salinisphaerales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13788..15143)
DNA (1356bp) protein (452aa)
Major facilitator superfamily sugar transporter n=1 Tax=uncultured bacterium RepID=K2AXI3_9BACT
Major facilitator superfamily sugar transporter {ECO:0000313|EMBL:KEZ77460.1}; TaxID=1304275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Salinisphaerales; Salinisphaeraceae; Salinisphaera.;" source="Salinisphaera hydrothermalis C41B8.;"
sugar porter (SP) family
scnpilot_solids1_trim150_scaffold_404_curated_17
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15537..16610
DNA (1074bp) protein (358aa)
Glucokinase {ECO:0000313|EMBL:EIL97975.1}; EC=2.7.1.2 {ECO:0000313|EMBL:EIL97975.1};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
glucokinase (EC:2.7.1.2)
Glucokinase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WET4_9GAMM
scnpilot_solids1_trim150_scaffold_404_curated_18
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16710..18572
DNA (1863bp) protein (621aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002DB387D
Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase {ECO:0000313|EMBL:AIF46392.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
putative lipoprotein
scnpilot_solids1_trim150_scaffold_404_curated_19
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18768..21995
DNA (3228bp) protein (1076aa)
TonB-dependent receptor n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VWS9_9GAMM
TonB-dependent receptor {ECO:0000313|EMBL:EIL91670.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
TonB-dependent receptor
scnpilot_solids1_trim150_scaffold_404_curated_20
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22045..22803
DNA (759bp) protein (253aa)
Copper homeostasis protein CutC n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YCZ4_9RHIZ
Copper homeostasis protein CutC {ECO:0000256|HAMAP-Rule:MF_00795}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
uncharacterized protein involved in copper resistance
scnpilot_solids1_trim150_scaffold_404_curated_21
Deinococcus peraridilitoris, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

22793..23743
DNA (951bp) protein (317aa)
Putative dehydrogenase n=1 Tax=Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200) RepID=L0A2E5_DEIPD
dehydrogenase
Putative dehydrogenase {ECO:0000313|EMBL:AFZ68021.1}; TaxID=937777 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416; / KR-200).;"
scnpilot_solids1_trim150_scaffold_404_curated_22
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23792..26032)
DNA (2241bp) protein (747aa)
DNA topoisomerase 4 subunit A {ECO:0000256|HAMAP-Rule:MF_00936}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00936};; Topoisomerase IV subunit A {ECO:0000256|HAMAP-Rule:MF_00936}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
DNA topoisomerase IV subunit A (EC:5.99.1.3)
DNA topoisomerase 4 subunit A n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WU47_9GAMM
scnpilot_solids1_trim150_scaffold_404_curated_23
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26206..27324)
DNA (1119bp) protein (373aa)
Cyclopropane fatty acyl phospholipid synthase {ECO:0000313|EMBL:EIL92532.1}; EC=2.1.1.79 {ECO:0000313|EMBL:EIL92532.1};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Cyclopropane fatty acyl phospholipid synthase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VZ91_9GAMM
methyltransferase, cyclopropane fatty acid synthase
scnpilot_solids1_trim150_scaffold_404_curated_24
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27434..27823)
DNA (390bp) protein (130aa)
Putative fluoride ion transporter CrcB n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3W7_9GAMM
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
camphor resistance protein CrcB
scnpilot_solids1_trim150_scaffold_404_curated_25
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28156..29415
DNA (1260bp) protein (420aa)
Putative major facilitator superfamily drug resistance transmembrane translocase transporter n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VZ88_9GAMM
Putative major facilitator superfamily drug resistance transmembrane translocase transporter {ECO:0000313|EMBL:EIL92529.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
drug resistance transporter, Bcr/CflA subfamily
scnpilot_solids1_trim150_scaffold_404_curated_26
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29461..30546)
DNA (1086bp) protein (362aa)
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
uroporphyrinogen decarboxylase (EC:4.1.1.37)
Uroporphyrinogen decarboxylase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WAY2_9GAMM
scnpilot_solids1_trim150_scaffold_404_curated_27
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30536..30799)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VZL4_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIL92655.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
scnpilot_solids1_trim150_scaffold_404_curated_28
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30956..32059)
DNA (1104bp) protein (368aa)
3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
3-dehydroquinate synthase n=1 Tax=Rhodanobacter denitrificans RepID=M4NBH9_9GAMM
scnpilot_solids1_trim150_scaffold_404_curated_29
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32056..32613)
DNA (558bp) protein (186aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
shikimate kinase (EC:2.7.1.71)
Shikimate kinase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJJ7_9GAMM
scnpilot_solids1_trim150_scaffold_404_curated_30
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32743..33600
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJJ6_9GAMM
Epimerase {ECO:0000313|EMBL:AHX12208.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
nucleoside-diphosphate-sugar epimerase
Displaying items 1-30 of 35 in total

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