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scnpilot_solids1_trim150_scaffold_2988_curated

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2988_curated_1
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..163)
DNA (162bp) protein (54aa)
aconitase A; K01681 aconitate hydratase 1 [EC:4.2.1.3]
Aconitate hydratase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE63_9GAMM
Aconitate hydratase {ECO:0000313|EMBL:EIL97754.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
scnpilot_solids1_trim150_scaffold_2988_curated_2
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(349..687)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Pseudomonas stutzeri MF28 RepID=U3HVN8_PSEST
Uncharacterized protein {ECO:0000313|EMBL:EQM78144.1}; TaxID=1333856 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri MF28.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2988_curated_3
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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822..2123
DNA (1302bp) protein (434aa)
aminoacyl-histidine dipeptidase (EC:3.4.13.3)
Aminoacyl-histidine dipeptidase n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=B8H355_CAUCN
Peptidase, M20/M25/M40 family {ECO:0000313|EMBL:AAK24994.1}; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus (strain ATCC 19089 / CB15).;"
scnpilot_solids1_trim150_scaffold_2988_curated_4
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2181..3524
DNA (1344bp) protein (448aa)
Glutathione reductase {ECO:0000313|EMBL:KGI77627.1}; EC=1.8.1.7 {ECO:0000313|EMBL:KGI77627.1};; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
glutathione-disulfide reductase; K00383 glutathione reductase (NADPH) [EC:1.8.1.7]
Glutathione-disulfide reductase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VNA6_9GAMM
scnpilot_solids1_trim150_scaffold_2988_curated_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3543..4226)
DNA (684bp) protein (228aa)
Short chain dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6Z9_9GAMM
Short chain dehydrogenase {ECO:0000313|EMBL:EIL95240.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
protein DitG
scnpilot_solids1_trim150_scaffold_2988_curated_6
Collimonas fungivorans, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4383..5507
DNA (1125bp) protein (375aa)
metA; homoserine O-acetyltransferase (EC:2.3.1.31); K00641 homoserine O-acetyltransferase [EC:2.3.1.31]
Homoserine O-acetyltransferase {ECO:0000256|SAAS:SAAS00070949}; EC=2.3.1.- {ECO:0000256|SAAS:SAAS00276255};; EC=2.3.1.31 {ECO:0000256|SAAS:SAAS00070942};; TaxID=1005048 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas fungivorans (strain Ter331).;"
Homoserine O-acetyltransferase n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0A9J2_COLFT
scnpilot_solids1_trim150_scaffold_2988_curated_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5603..6658
DNA (1056bp) protein (352aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE14_9GAMM
ribosome small subunit-dependent GTPase A
scnpilot_solids1_trim150_scaffold_2988_curated_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6823..7206
DNA (384bp) protein (128aa)
Malic enzyme n=1 Tax=Rhodanobacter denitrificans RepID=M4NKE9_9GAMM
malic enzyme
Malic enzyme {ECO:0000313|EMBL:AGG90547.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying 8 items

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