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scnpilot_solids1_trim150_scaffold_827_curated_5

Organism: solids_Rhodanobacter_4

partial RP 24 / 55 MC: 2 BSCG 23 / 51 MC: 2 ASCG 9 / 38
Location: comp(2331..3362)

Top 3 Functional Annotations

Value Algorithm Source
ribosomal large subunit pseudouridine synthase C (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 80.4
  • Coverage: 317.0
  • Bit_score: 524
  • Evalue 2.70e-146
Pseudouridine synthase n=1 Tax=Rhodanobacter denitrificans RepID=M4NDY9_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 80.4
  • Coverage: 317.0
  • Bit_score: 524
  • Evalue 8.70e-146
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 81.1
  • Coverage: 317.0
  • Bit_score: 529
  • Evalue 3.80e-147

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Taxonomy

RIFOXYA1_FULL_Rhodanobacter_67_6_curated → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1032
ATGCAAACCGCAGCTTCCCTTCATCCTGCGCAGGGTGTGCGTCAAGTTCAGGTCGGCCCGGAGCGCGACGGCCAGCGTATCGACAATGCGCTGCTGACGCTGTTGAAAGGGGTTCCCAAGAGCATGATCTACCGCCTGTTGCGTACCGGCCAGGTGCGTGTGAACGGCAGGCGGGCCAAGCCCGATACCCGTCTCGTCGACGGCGATACGCTGCGCATTCCGCCCATCCGTGCAGCCGAGAAGGCGGATGGCGCGGCACCGTCCGCCGAGCAAATGGCCGAGCTTGAGGACAGTATCATTTTCCAGGATCGGCACTTCCTGGTGATCGACAAGCCTGCAGGCGTGGCCAGCCACGGCGGCAGCGGGATCAGTCACGGCGCCATCGAACTGCTGCGTGCGGCGCGACCGCAGGAGCACCTCGAACTGGTGCATCGGCTCGACCGCGACACCAGCGGCGTGCTGGTCCTGGCCCGCACGCGCGTCGGACTGGTTGGTCTGCAGGCGGCGATTCGCGAGGGCACGGTGACCAAGCAATACCTGTGTCTGTTGTTGGGGCAGCCAGCCAAGGCCAAGTTCGACGTGAACGTGCCCTTGCGCAAGTCGGTGTTGCAGGGCGGCGAGCGCATGGTGCGCGTGGCCGACGACGGCAAGCCGGCGCTGACTTTTTTTCGCGACGTCGAGTCCTATCCCGGGGCGCGCCTGATGCAGGCCACGCTGGCCACGGGCCGGACCCACCAGATCCGTGCGCATGCCGCGCACATTGGCCACCCCCTGGCCGGGGACCCGAAATACGGCGATCGCGAGGCCAACAAGCGCTTTCGCGAGCTTGGCCTGCACCGCATGTTCCTGCATGCGGCCCACCTCAGTTTCGACCTCGACGGGCGCACCTACAGCTTTTCCGCGCCCTTGCCGGAGGAGCTGAAGACCTTCCTGGATACGCTGGCTGCGCAAAGGTTCGAGGCGCGTCCGCGTCGGCCCTGCGCGGCGCCTACGCCGTCGCCGTCAGCGCGTCGACCCGCGCGGCGCAGATGA
PROTEIN sequence
Length: 344
MQTAASLHPAQGVRQVQVGPERDGQRIDNALLTLLKGVPKSMIYRLLRTGQVRVNGRRAKPDTRLVDGDTLRIPPIRAAEKADGAAPSAEQMAELEDSIIFQDRHFLVIDKPAGVASHGGSGISHGAIELLRAARPQEHLELVHRLDRDTSGVLVLARTRVGLVGLQAAIREGTVTKQYLCLLLGQPAKAKFDVNVPLRKSVLQGGERMVRVADDGKPALTFFRDVESYPGARLMQATLATGRTHQIRAHAAHIGHPLAGDPKYGDREANKRFRELGLHRMFLHAAHLSFDLDGRTYSFSAPLPEELKTFLDTLAAQRFEARPRRPCAAPTPSPSARRPARRR*