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scnpilot_solids1_trim150_scaffold_1034_curated_2

Organism: solids_Rhodanobacter_4

partial RP 24 / 55 MC: 2 BSCG 23 / 51 MC: 2 ASCG 9 / 38
Location: comp(943..2820)

Top 3 Functional Annotations

Value Algorithm Source
Protein translocase subunit SecD n=1 Tax=Rhodanobacter denitrificans RepID=I4WNS5_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 81.2
  • Coverage: 627.0
  • Bit_score: 985
  • Evalue 3.30e-284
protein-export membrane protein, SecD/SecF family similarity KEGG
DB: KEGG
  • Identity: 81.0
  • Coverage: 627.0
  • Bit_score: 983
  • Evalue 3.00e-284
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.0
  • Coverage: 627.0
  • Bit_score: 983
  • Evalue 1.30e-283

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1878
ATGAATGATTTTCCGCGCTGGCGTTATTGGCTGGTAGCCGTGGTGATGCTGTTTGGCGTCGTCTACGCGCTGCCCAACGCCTATTTGTCCATACCTGGCGTGCAGGTCACGGCCAACCGCGGCGCTGCGCCGGTGGACGACGCCTTGCGGCAAAAGGTGGCGACGGCGCTGGTCACGGCCAAGATCCCCTCCAGTGGGGTCGAAATCGACGGCGACCACCTGCTGGCCACGTTTGCCGACGCCGACACCCAGCGGCGGGCGGCCGAGGCGCTGCAGACCGATCTTGGCGACGGCTATACGGTGACGTTCAAGCCCAAGTCCACGGTGCCGGCATGGTTGCAGCTGATCGGCGCGCGGGCCATGCCGCTCGGCCTGGATTTGCAAGGTGGCGTGCATTTCGTGATGCAGGTCGACCAGAAGGAGGCGATCGACAAGCAGGAGGCGAGTTACGCCGACGACATCCGCATCAACCTGCGCGACAAGAACGTGCGCTACCAGTCGGTGGCGACCAGGCCCAGCGGCGGCATCAGCGTGGTGCTGCGTTCGGCCGAGGATCGCAGCACGGCGGCCAACATCATTGCCAACCAGAACCCGGACCTGAACGTGGCCGACGGGCCGAGCACCGGTGACCGTTTCATCCTCAACGTGGTCATCAAGCCGGAAAAAGTGCGCGACATGTCGATCAACGCGATCCGGCAGAACCTCGGCACCTTGCGCAACCGCATCAACGCGCTCGGCGTGTCCGAGCCGCTGATCCAGCAGCAGGGCGACAGCCACATCGTGGTCGAGCTGGCCGGCGTGCAGGATCCGGCCGAAGCCAAGAAGCTGATCGGCGCGACGGCCACGCTGCAATACCGGCCGGGCATCGGCCAGCCGGGCGACGCCCGGGCCACCGAGGCCGCGCGCACCGGCAGCATCCCGCCTGACGCCAACCTGTACTACATGCGTGACACGCGCCAGCCGGTGCTGGTCAGCAAGCAGATCATCGTTACCGGCAACCAGCTGGTGGACGCCTCCTCCGGCATCGACCAGCAGACCGGCACGCCGAAGGTCGACGTCACCCTGAATGCCGCCGGCGCCAAGCGCATGGCGGATTTCACCAACGCCAACGTCGGCAAGCCGATGGCCGTGGTCTACGTGGAACGCGTGGTCGAGACCAAGATCGTCGATGGCAAGGAAGTGCGCACGGCCAAGATCACCGAGTCGGTGATCAACGACGCCTCCATCGCTAGCCCGTTCAGCAAGCAATTCCAGACCACCGGCCTTGCCAGTCCCAAGGAGGCCTCGGAGCTGGCCCTGCTGCTCAAGGGCGGGTCGCTGGCAGCGCCGATGGACATCGTCGAGGAGCGGGTCATCGGTCCGAGCCTCGGCCAGGACAATATCGAAAAGGGCTTGAATGCGGTGATCATCGGCCTGGCCCTGGTGCTTGGCGCCGCGGCGGTCTACTACAAGTTGTTCGGCGTGGTGGCCGACATCGCGCTGTTCTTCAACCTGGTGATCCTGGTGGCGGTGATGTCGCTGATCGGGGTCACCCTGACCATGCCGGGCATCGCCGGTATCGTCCTGACCCTGGGCATGGCGATCGACGCCAACGTGCTGATCTGCGAGCGCGTGCGCGAGGAATTGCGCAACGGCTCCAGCCCGCACGCGGCGATCCGCGCCGGCTACGAGAAGGCCTGGTCCACCATCCTGGATGCCAACGTCACCCACCTGATCGCGGCGCTGGCGCTGACCACCATGGGCACGGGTGCGATCAAGGGCTTCGGCGTCACGCTCCTGATCGGTATCCTCACCTCCCTGTTCACCTCGGTGACCCTGACCCACGCCTTTACCGCGGCCATCCACGGCCACCGCAAGCTCAAGACTTTGTCGGTTTAA
PROTEIN sequence
Length: 626
MNDFPRWRYWLVAVVMLFGVVYALPNAYLSIPGVQVTANRGAAPVDDALRQKVATALVTAKIPSSGVEIDGDHLLATFADADTQRRAAEALQTDLGDGYTVTFKPKSTVPAWLQLIGARAMPLGLDLQGGVHFVMQVDQKEAIDKQEASYADDIRINLRDKNVRYQSVATRPSGGISVVLRSAEDRSTAANIIANQNPDLNVADGPSTGDRFILNVVIKPEKVRDMSINAIRQNLGTLRNRINALGVSEPLIQQQGDSHIVVELAGVQDPAEAKKLIGATATLQYRPGIGQPGDARATEAARTGSIPPDANLYYMRDTRQPVLVSKQIIVTGNQLVDASSGIDQQTGTPKVDVTLNAAGAKRMADFTNANVGKPMAVVYVERVVETKIVDGKEVRTAKITESVINDASIASPFSKQFQTTGLASPKEASELALLLKGGSLAAPMDIVEERVIGPSLGQDNIEKGLNAVIIGLALVLGAAAVYYKLFGVVADIALFFNLVILVAVMSLIGVTLTMPGIAGIVLTLGMAIDANVLICERVREELRNGSSPHAAIRAGYEKAWSTILDANVTHLIAALALTTMGTGAIKGFGVTLLIGILTSLFTSVTLTHAFTAAIHGHRKLKTLSV*