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scnpilot_solids1_trim150_scaffold_1034_curated_12

Organism: solids_Rhodanobacter_4

partial RP 24 / 55 MC: 2 BSCG 23 / 51 MC: 2 ASCG 9 / 38
Location: comp(12904..13203)

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Dyella ginsengisoli RepID=UPI0003482EA4 similarity UNIREF
DB: UNIREF100
  • Identity: 93.9
  • Coverage: 99.0
  • Bit_score: 188
  • Evalue 3.30e-45
Integration host factor subunit alpha {ECO:0000256|HAMAP-Rule:MF_00380, ECO:0000256|RuleBase:RU004485}; Short=IHF-alpha {ECO:0000256|HAMAP-Rule:MF_00380};; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.9
  • Coverage: 99.0
  • Bit_score: 186
  • Evalue 1.80e-44
integration host factor, alpha subunit similarity KEGG
DB: KEGG
  • Identity: 91.9
  • Coverage: 99.0
  • Bit_score: 185
  • Evalue 6.70e-45

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Taxonomy

Dyella jiangningensis → Dyella → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 300
ATGGCGCTGACCAAGGCCGAGATGGCCGAGCGGCTGTTTTTCGAGGTAGGCCTCAACAAGCGCGAAGCCAAGGAATTCGTGGACGCCTATTTCGAGGTCATCCGCGAAGCGCTGGAAAATGGTGAGCAGGTGAAGCTCTCCGGTTTCGGCAACTTCGACCTGCGCATGAAGAGTCAACGGCCCGGACGCAACCCGAAGACCGGCGAGGAGATTCCGATTTCTGCCCGACGCGTGGTCACCTTCCGCCCGGGACAGAAGCTCAAGATGAGAGTGGAAGGGTATGCTGGACCAGGGGAATAA
PROTEIN sequence
Length: 100
MALTKAEMAERLFFEVGLNKREAKEFVDAYFEVIREALENGEQVKLSGFGNFDLRMKSQRPGRNPKTGEEIPISARRVVTFRPGQKLKMRVEGYAGPGE*