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scnpilot_solids1_trim150_scaffold_586_curated_22

Organism: solids_Rhodanobacter_4

partial RP 24 / 55 MC: 2 BSCG 23 / 51 MC: 2 ASCG 9 / 38
Location: comp(28256..29518)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-24 n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XHY5_SORCE similarity UNIREF
DB: UNIREF100
  • Identity: 70.6
  • Coverage: 419.0
  • Bit_score: 559
  • Evalue 3.00e-156
RNA polymerase subunit sigma-24 {ECO:0000313|EMBL:KGM53395.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.4
  • Coverage: 422.0
  • Bit_score: 573
  • Evalue 2.10e-160
RNA polymerase subunit sigma-24 similarity KEGG
DB: KEGG
  • Identity: 70.6
  • Coverage: 419.0
  • Bit_score: 559
  • Evalue 9.40e-157

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Taxonomy

Lysobacter daejeonensis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1263
ATGACCGCGACCGACACCCATCGCAGCATCGAGGCAGTGTGGAAGATCGAAGCGCCGCGCCTGATTGCCGCCCTGGCGCGCATGCTGCGCGATGTCGGCCAGGCCGAGGATTTGCTGCAGGAGGCATTGCTGGTGGCCCTCGAGCGCTGGCCGCGCGACGGCGTGCCGGACAATCCCGGGGCCTGGCTGATGACCACAGCCAAGCGCCGCGCCATCGACACGCTGCGCCATCGGCAAATGCGCGACAGCAAGCGCCCGGCACTCGAATATGAGCTCGAGAACGGACCGACGGCACCTGCACCGGACCAGGCCGAGATGCTGGACGACGACATTGGCGACGACTTGTTGCGGCTGATCTTCACCGCCTGCCACCCCGCGCTCGGCCGCGACATGCAGGTGGCGCTGACCTTGCGCATGCTGGGCGGCCTCACCACCCGGGAAATCGCCCGCGCGTTCCTGGTGCCCGAGGCGACCGTCGCACAACGCATCGTGCGCGCCAAGCGCATGCTGGCGGAGAAGCAGGTGCCCTTCTGCGTGCCGCGCGGCGAGGAGCTCGCACCCCGCCTGGCGAGCGTGCTCGAGGTGGTCTACCTGATCTTCAACGAGGGCTATACCGCCACCGCGGGCGACACCTGGGCGCGGCCGGACCTGTGCGAGGAAGCACTGCGCCTGGGCCGCATCCTGGCCGAGCTGGCGACGGACGAAGCCGAGGTCCACGGCCTGGTGGCGCTGATGGAAATCCAGGCCTCGCGGCTGCATTCGCGCAGCCGCGCCGACGGCACGCCGATCCTGCTGCTGGAGCAGGACCGCACGCGCTGGGACCGGCTGCTGATCCAGCGCGGGCTCGCAGCCCTGGTCCGCGCGCAAAAACTGGGCGGCGCGGACGGCAGCTACGCCCTGCAGGCGGCCATTGCCGCCTGCCATGCGCGTGCCTTGCACGCGATGGACACCGACTGGCCAAGCATTGCCGCGCTGTATGCCCGCCTGGCTGCCGTGGCGCCGTCGCCGGTCGTCGAATTGAACCGCGCCGTCGCGGTGTCGATGGCCGATGGCCCGGCGGCAGGGCTGGCACTCGTGGACGGGCTATGCCGCGAGGGCACGCTTGCCCACTATCACCTCCTGGCCAGCGTACGCGGCGACCTGCTGTTCAAGCTGGGTCGGCACGCCGAGGCGCGGGCCGAGTTCGAGCACGCGGCGACGCTCACCGGCAACACGCGCGAATCCACGCTGCTGCAGCGGCGCGCCGCGGCGTGCGCCGCATGA
PROTEIN sequence
Length: 421
MTATDTHRSIEAVWKIEAPRLIAALARMLRDVGQAEDLLQEALLVALERWPRDGVPDNPGAWLMTTAKRRAIDTLRHRQMRDSKRPALEYELENGPTAPAPDQAEMLDDDIGDDLLRLIFTACHPALGRDMQVALTLRMLGGLTTREIARAFLVPEATVAQRIVRAKRMLAEKQVPFCVPRGEELAPRLASVLEVVYLIFNEGYTATAGDTWARPDLCEEALRLGRILAELATDEAEVHGLVALMEIQASRLHSRSRADGTPILLLEQDRTRWDRLLIQRGLAALVRAQKLGGADGSYALQAAIAACHARALHAMDTDWPSIAALYARLAAVAPSPVVELNRAVAVSMADGPAAGLALVDGLCREGTLAHYHLLASVRGDLLFKLGRHAEARAEFEHAATLTGNTRESTLLQRRAAACAA*