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scnpilot_solids1_trim150_scaffold_586_curated

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Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_586_curated_1
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

209..1180
DNA (972bp) protein (324aa)
ABC transporter phosphate permease n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8J0_9GAMM
ABC transporter phosphate permease {ECO:0000313|EMBL:EIL95781.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
pstC; phosphate ABC transporter permease; K02037 phosphate transport system permease protein
scnpilot_solids1_trim150_scaffold_586_curated_2
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1180..2052
DNA (873bp) protein (291aa)
Phosphate ABC transporter permease PstA n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8J1_9GAMM
Phosphate ABC transporter permease PstA {ECO:0000313|EMBL:EIL95782.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
phosphate ABC transporter permease PstA; K02038 phosphate transport system permease protein
scnpilot_solids1_trim150_scaffold_586_curated_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2045..2863
DNA (819bp) protein (273aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
phosphate ABC transporter ATP-binding protein; K02036 phosphate transport system ATP-binding protein [EC:3.6.3.27]
Phosphate transporter ATP-binding protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VWR1_9GAMM
scnpilot_solids1_trim150_scaffold_586_curated_4
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2860..3561
DNA (702bp) protein (234aa)
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae CC-JY-1.;"
Phosphate uptake regulator, PhoU id=2616491 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
putative phosphate transport system-like protein; K02039 phosphate transport system protein
scnpilot_solids1_trim150_scaffold_586_curated_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3668..4297
DNA (630bp) protein (210aa)
Phosphoesterase PA-phosphatase-like protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5H3_9GAMM
Phosphoesterase PA-phosphatase-like protein {ECO:0000313|EMBL:EIL94714.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
PAP2 superfamily protein
scnpilot_solids1_trim150_scaffold_586_curated_6

Not on your lists

comp(4386..7472)
DNA (3087bp) protein (1029aa)
Multidrug resistance protein n=4 Tax=mine drainage metagenome RepID=T1C5D4_9ZZZZ
Multidrug resistance protein {ECO:0000313|EMBL:EQD77212.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
acriflavin resistance protein
scnpilot_solids1_trim150_scaffold_586_curated_7
Acidithiobacillus caldus, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7486..8574)
DNA (1089bp) protein (363aa)
Probable Co/Zn/Cd efflux system membrane fusion protein n=1 Tax=Acidithiobacillus caldus (strain SM-1) RepID=F9ZR55_ACICS
Co/Zn/Cd efflux system membrane fusion protein
Probable Co/Zn/Cd efflux system membrane fusion protein {ECO:0000313|EMBL:AEK58791.1}; TaxID=990288 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus caldus (strain SM-1).;"
scnpilot_solids1_trim150_scaffold_586_curated_8

Not on your lists

comp(8629..10323)
DNA (1695bp) protein (565aa)
RND efflux system, outer membrane lipoprotein, NodT family n=2 Tax=mine drainage metagenome RepID=T1D6Z7_9ZZZZ
RND efflux system, outer membrane lipoprotein, NodT family {ECO:0000313|EMBL:EQD77214.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
tripartite multidrug resistance system outer membrane protein
scnpilot_solids1_trim150_scaffold_586_curated_9
Tatlockia micdadei, Tatlockia, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10388..11089
DNA (702bp) protein (234aa)
3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:CEG60193.1}; EC=1.1.1.100 {ECO:0000313|EMBL:CEG60193.1};; TaxID=451 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Tatlockia.;" source="Tatlockia micdadei (Legionella micdadei).;"
Uncharacterized protein n=1 Tax=Methylomicrobium album BG8 RepID=H8GIV8_METAL
hypothetical protein
scnpilot_solids1_trim150_scaffold_586_curated_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11210..12607)
DNA (1398bp) protein (466aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW64_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL91455.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
H+/gluconate symporter family protein
scnpilot_solids1_trim150_scaffold_586_curated_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12777..14993
DNA (2217bp) protein (739aa)
Outer membrane receptor protein n=1 Tax=Rhodanobacter denitrificans RepID=M4ND64_9GAMM
outer membrane receptor protein
Outer membrane receptor protein {ECO:0000313|EMBL:AGG88675.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_586_curated_12
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15635..18955
DNA (3321bp) protein (1107aa)
Putative two component regulator sensor histidine kinase/response regulator fusion transcriptional regulator n=1 Tax=Rhodanobacter denitrificans RepID=I4WVA3_9GAMM
Putative two component regulator sensor histidine kinase/response regulator fusion transcriptional regulator {ECO:0000313|EMBL:EIL99409.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
signal transduction histidine kinase
scnpilot_solids1_trim150_scaffold_586_curated_13
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19045..19692)
DNA (648bp) protein (216aa)
Two component LuxR family transcriptional regulator n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIW6_9GAMM
Two component LuxR family transcriptional regulator {ECO:0000313|EMBL:EIL99407.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
scnpilot_solids1_trim150_scaffold_586_curated_14
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19805..21661
DNA (1857bp) protein (619aa)
Putative D--3-hydroxybutyrate oligomer hydrolase lipoprotein transmembrane n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIW5_9GAMM
Putative D--3-hydroxybutyrate oligomer hydrolase lipoprotein transmembrane {ECO:0000313|EMBL:EIL99406.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
3HB-oligomer hydrolase (3HBOH)
scnpilot_solids1_trim150_scaffold_586_curated_15
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21776..22696)
DNA (921bp) protein (307aa)
glutathione S-transferase protein (EC:2.5.1.18)
Glutathione S-transferase protein {ECO:0000313|EMBL:AGS24056.1}; EC=2.5.1.18 {ECO:0000313|EMBL:AGS24056.1};; TaxID=1328306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. Mim1.;"
Glutathione S-transferase protein n=2 Tax=Rhizobium etli RepID=S5S9E1_RHIET
scnpilot_solids1_trim150_scaffold_586_curated_16
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22809..24068)
DNA (1260bp) protein (420aa)
Penicillin-binding protein, beta-lactamase class C n=1 Tax=Rhodanobacter denitrificans RepID=M4NGU4_9GAMM
penicillin-binding protein, beta-lactamase class C
Penicillin-binding protein, beta-lactamase class C {ECO:0000313|EMBL:AGG89317.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_586_curated_17
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24215..25354)
DNA (1140bp) protein (380aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GQM0_PUSST
Uncharacterized protein {ECO:0000313|EMBL:KIF83807.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_586_curated_18
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25351..26196)
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TT64_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU99220.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
scnpilot_solids1_trim150_scaffold_586_curated_19
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

26395..26868
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00036DB3C1
PHP-like protein; K02347 DNA polymerase (family X)
PHP-like protein {ECO:0000313|EMBL:ABG03460.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
scnpilot_solids1_trim150_scaffold_586_curated_20
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27159..27653)
DNA (495bp) protein (165aa)
3-demethylubiquinone-9 3-methyltransferase n=1 Tax=Sphingomonas sp. LH128 RepID=J8VKB4_9SPHN
3-demethylubiquinone-9 3-methyltransferase {ECO:0000313|EMBL:KGI78634.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
3-demethylubiquinone-9 3-methyltransferase
scnpilot_solids1_trim150_scaffold_586_curated_21
Achromobacter arsenitoxydans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27882..28238)
DNA (357bp) protein (119aa)
DGPF domain-containing protein 1 n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0FDR1_9BURK
DGPF domain-containing protein 1 {ECO:0000313|EMBL:EHK63572.1}; TaxID=477184 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter arsenitoxydans SY8.;"
DGPF domain-containing protein 1
scnpilot_solids1_trim150_scaffold_586_curated_22
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28256..29518)
DNA (1263bp) protein (421aa)
RNA polymerase subunit sigma-24 n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XHY5_SORCE
RNA polymerase subunit sigma-24 {ECO:0000313|EMBL:KGM53395.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
RNA polymerase subunit sigma-24
scnpilot_solids1_trim150_scaffold_586_curated_23
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29575..29991)
DNA (417bp) protein (139aa)
dehydrogenase n=1 Tax=Leptolyngbya boryana RepID=UPI000378E67B
Dehydrogenase {ECO:0000313|EMBL:GAN44996.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_586_curated_24
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30221..30574
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WAR2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL96553.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
scnpilot_solids1_trim150_scaffold_586_curated_25
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30741..31544)
DNA (804bp) protein (268aa)
Inositol monophosphatase/fructose-1,6-bisphosphatase family protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRP0_9GAMM
Inositol monophosphatase/fructose-1,6-bisphosphatase family protein {ECO:0000313|EMBL:EIM02132.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
inositol monophosphatase/fructose-1,6-bisphosphatase family protein
scnpilot_solids1_trim150_scaffold_586_curated_26
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31839..32618
DNA (780bp) protein (260aa)
tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ {ECO:0000256|RuleBase:RU362024}; EC=2.1.1.200 {ECO:0000256|RuleBase:RU362024};; tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase {ECO:0000256|RuleBase:RU362024}; tRNA Cm32/Um32 methyltransferase {ECO:0000256|RuleBase:RU362024}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
tRNA/rRNA methyltransferase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VKM2_9GAMM
RNA methyltransferase, TrmH family, group 1
scnpilot_solids1_trim150_scaffold_586_curated_27
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32771..33694
DNA (924bp) protein (308aa)
Peptidoglycan-binding domain 1 protein n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RF47_DESPD
peptidoglycan-binding domain 1 protein
Peptidoglycan-binding domain 1 protein {ECO:0000313|EMBL:ADW18138.1}; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3).;"
scnpilot_solids1_trim150_scaffold_586_curated_28
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33804..34577
DNA (774bp) protein (258aa)
phosphatase n=1 Tax=Dyella ginsengisoli RepID=UPI0003687D98
Phosphatase {ECO:0000313|EMBL:AHX12364.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
haloacid dehalogenase superfamily protein, phosphoserine phosphatase/2,3-diketo-5-methylthio-1-phosphopentane phosphatase
scnpilot_solids1_trim150_scaffold_586_curated_29
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34595..36001
DNA (1407bp) protein (469aa)
4-aminobutyrate aminotransferase family protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WNU2_9GAMM
4-aminobutyrate aminotransferase family protein
4-aminobutyrate aminotransferase family protein {ECO:0000313|EMBL:AGG88241.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_586_curated_30
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36046..36330
DNA (285bp) protein (95aa)
Acyl carrier protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WNU6_9GAMM
acyl carrier protein
Acyl carrier protein {ECO:0000313|EMBL:AGG88244.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying items 1-30 of 65 in total

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