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scnpilot_solids1_trim150_scaffold_765_curated

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_765_curated_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..949
DNA (948bp) protein (316aa)
Chloride channel protein EriC n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W022_9GAMM
Chloride channel protein EriC {ECO:0000313|EMBL:EIL92813.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
chloride channel protein EriC
scnpilot_solids1_trim150_scaffold_765_curated_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

998..2227
DNA (1230bp) protein (410aa)
Imidazolonepropionase {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112}; EC=3.5.2.7 {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112};; Imidazolone-5-propionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00372}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
imidazolonepropionase (EC:3.5.2.7)
Imidazolonepropionase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W023_9GAMM
scnpilot_solids1_trim150_scaffold_765_curated_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2213..3199)
DNA (987bp) protein (329aa)
Tetraacyldisaccharide 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093884}; EC=2.7.1.130 {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093878};; Lipid A 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Tetraacyldisaccharide 4'-kinase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W024_9GAMM
tetraacyldisaccharide 4''-kinase
scnpilot_solids1_trim150_scaffold_765_curated_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3209..4993)
DNA (1785bp) protein (595aa)
Lipid A export ATP-binding/permease protein MsbA {ECO:0000256|HAMAP-Rule:MF_01703}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01703};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Lipid A export permease/ATP-binding protein MsbA n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W025_9GAMM
lipid A export permease/ATP-binding protein MsbA
scnpilot_solids1_trim150_scaffold_765_curated_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4990..5421)
DNA (432bp) protein (144aa)
Biopolymer transport protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W026_9GAMM
Biopolymer transport protein {ECO:0000313|EMBL:EIL92817.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
biopolymer transport protein
scnpilot_solids1_trim150_scaffold_765_curated_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5432..6097)
DNA (666bp) protein (222aa)
Biopolymer transport protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W027_9GAMM
Biopolymer transport protein {ECO:0000313|EMBL:EIL92818.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
biopolymer transport protein
scnpilot_solids1_trim150_scaffold_765_curated_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6197..8497)
DNA (2301bp) protein (767aa)
DNA internalization-related competence protein ComEC/Rec2 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W028_9GAMM
DNA internalization-related competence protein ComEC/Rec2 {ECO:0000313|EMBL:EIL92819.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
DNA internalization-related competence protein ComEC/Rec2
scnpilot_solids1_trim150_scaffold_765_curated_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8590..9303)
DNA (714bp) protein (238aa)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708, ECO:0000256|SAAS:SAAS00041694}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708, ECO:0000256|SAAS:SAAS00041671};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ABC transporter ATP-binding protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W029_9GAMM
lipoprotein releasing system, ATP-binding protein
scnpilot_solids1_trim150_scaffold_765_curated_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9296..10537)
DNA (1242bp) protein (414aa)
Lipoprotein releasing system transmembrane protein LolC/E family n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W030_9GAMM
Lipoprotein releasing system transmembrane protein LolC/E family {ECO:0000313|EMBL:EIL92821.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
lipoprotein releasing system, transmembrane protein, LolC/E family
scnpilot_solids1_trim150_scaffold_765_curated_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10636..11073)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W031_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92822.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_765_curated_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11045..11293)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W032_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92823.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_765_curated_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11396..12178)
DNA (783bp) protein (261aa)
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
succinate dehydrogenase subunit B (EC:1.3.5.1)
Succinate dehydrogenase iron-sulfur subunit n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W033_9GAMM
scnpilot_solids1_trim150_scaffold_765_curated_13
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12276..14063)
DNA (1788bp) protein (596aa)
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
succinate dehydrogenase, flavoprotein subunit; K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1]
Succinate dehydrogenase flavoprotein subunit n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W034_9GAMM
scnpilot_solids1_trim150_scaffold_765_curated_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14083..14487)
DNA (405bp) protein (135aa)
succinate dehydrogenase subunit D (EC:1.3.5.1)
Succinate dehydrogenase membrane anchor subunit n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W035_9GAMM
Succinate dehydrogenase membrane anchor subunit {ECO:0000313|EMBL:EIL92826.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids1_trim150_scaffold_765_curated_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14484..14879)
DNA (396bp) protein (132aa)
Succinate dehydrogenase membrane anchor subunit n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W036_9GAMM
Succinate dehydrogenase membrane anchor subunit {ECO:0000313|EMBL:EIL92827.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
succinate dehydrogenase, cytochrome b556 subunit; K00241 succinate dehydrogenase cytochrome b556 subunit
scnpilot_solids1_trim150_scaffold_765_curated_16
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15184..16059
DNA (876bp) protein (292aa)
Folate-binding protein YgfZ n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W038_9GAMM
Folate-binding protein YgfZ {ECO:0000313|EMBL:EIL92829.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
folate-binding protein YgfZ
scnpilot_solids1_trim150_scaffold_765_curated_17
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16532..16966
DNA (435bp) protein (145aa)
Cell wall hydrolase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W039_9GAMM
Cell wall hydrolase {ECO:0000313|EMBL:EIL92830.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Cell Wall Hydrolase
scnpilot_solids1_trim150_scaffold_765_curated_18
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17093..17590)
DNA (498bp) protein (166aa)
17 kDa surface antigen n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W040_9GAMM
17 kDa surface antigen {ECO:0000313|EMBL:EIL92831.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
outer membrane lipoprotein
scnpilot_solids1_trim150_scaffold_765_curated_19
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17626..18213)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W041_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92832.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative outer membrane lipoprotein
scnpilot_solids1_trim150_scaffold_765_curated_20
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18385..19152
DNA (768bp) protein (256aa)
TatD family hydrolase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W042_9GAMM
TatD family hydrolase {ECO:0000313|EMBL:EIL92833.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hydrolase, TatD family
scnpilot_solids1_trim150_scaffold_765_curated_21
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19219..19743
DNA (525bp) protein (175aa)
MarR family transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W043_9GAMM
MarR family transcriptional regulator {ECO:0000313|EMBL:EIL92834.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
transcriptional regulator
scnpilot_solids1_trim150_scaffold_765_curated_22
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19755..21233
DNA (1479bp) protein (493aa)
NodT family RND efflux system outer membrane lipoprotein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W044_9GAMM
NodT family RND efflux system outer membrane lipoprotein {ECO:0000313|EMBL:EIL92835.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
efflux transporter, outer membrane factor lipoprotein, NodT family
scnpilot_solids1_trim150_scaffold_765_curated_23
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21220..22425
DNA (1206bp) protein (402aa)
Efflux pump membrane protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W045_9GAMM
Efflux pump membrane protein {ECO:0000313|EMBL:EIL92836.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
multidrug resistance efflux pump
scnpilot_solids1_trim150_scaffold_765_curated_24
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22437..23999
DNA (1563bp) protein (521aa)
EmrB/QacA subfamily drug resistance transporter n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W046_9GAMM
EmrB/QacA subfamily drug resistance transporter {ECO:0000313|EMBL:EIL92837.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
drug resistance transporter, EmrB/QacA subfamily
scnpilot_solids1_trim150_scaffold_765_curated_25
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24079..24576
DNA (498bp) protein (166aa)
Polyhydroxyalkonate synthesis repressor PhaR n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W047_9GAMM
Polyhydroxyalkonate synthesis repressor PhaR {ECO:0000313|EMBL:EIL92838.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
polyhydroxyalkanoate synthesis repressor PhaR
scnpilot_solids1_trim150_scaffold_765_curated_26
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24702..25463
DNA (762bp) protein (254aa)
3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100)
3-oxoacyl-ACP reductase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W048_9GAMM
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:EIL92839.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids1_trim150_scaffold_765_curated_27
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25695..27248
DNA (1554bp) protein (518aa)
Peptidase M4, thermolysin n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WP92_9GAMM
Peptidase M4, thermolysin {ECO:0000313|EMBL:EIM01284.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Zinc metalloprotease (elastase)
scnpilot_solids1_trim150_scaffold_765_curated_28
unknown

Not on your lists

comp(27191..27319)
DNA (129bp) protein (43aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_765_curated_29
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27391..28794
DNA (1404bp) protein (468aa)
Kynurenine 3-monooxygenase {ECO:0000256|HAMAP-Rule:MF_01971}; EC=1.14.13.9 {ECO:0000256|HAMAP-Rule:MF_01971};; Kynurenine 3-hydroxylase {ECO:0000256|HAMAP-Rule:MF_01971}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Kynurenine 3-monooxygenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W050_9GAMM
2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase
scnpilot_solids1_trim150_scaffold_765_curated_30
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28787..29194
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W051_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92842.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Protein of unknown function (DUF3293)
Displaying items 1-30 of 47 in total

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