ggKbase home page

scnpilot_solids1_trim150_scaffold_1743_curated

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1743_curated_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..280
DNA (279bp) protein (93aa)
Copper-containing nitrite reductase {ECO:0000313|EMBL:ADE28551.1}; EC=1.7.2.1 {ECO:0000313|EMBL:ADE28551.1};; Dissimilatory nitrite reductase (NO-forming), copper type apoprotein {ECO:0000313|EMBL:AGG89997.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Copper-containing nitrite reductase n=2 Tax=Rhodanobacter RepID=D5JAK6_9GAMM
dissimilatory nitrite reductase (NO-forming), copper type apoprotein
scnpilot_solids1_trim150_scaffold_1743_curated_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

282..1043
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1Q2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93393.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1743_curated_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1053..1637
DNA (585bp) protein (195aa)
SCO1/SenC family protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1Q3_9GAMM
SCO1/SenC family protein {ECO:0000313|EMBL:EIL93394.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems
scnpilot_solids1_trim150_scaffold_1743_curated_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1907..2344
DNA (438bp) protein (146aa)
Integral membrane protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1C7_9GAMM
Integral membrane protein {ECO:0000313|EMBL:EIL93268.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1743_curated_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2371..2871
DNA (501bp) protein (167aa)
Probable thiol peroxidase {ECO:0000256|HAMAP-Rule:MF_00269}; EC=1.11.1.- {ECO:0000256|HAMAP-Rule:MF_00269};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
peroxiredoxin (EC:1.11.1.5)
Probable thiol peroxidase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1C8_9GAMM
scnpilot_solids1_trim150_scaffold_1743_curated_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2935..3351)
DNA (417bp) protein (139aa)
Globin n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1C9_9GAMM
Globin {ECO:0000313|EMBL:EIL93270.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
truncated hemoglobin
scnpilot_solids1_trim150_scaffold_1743_curated_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3445..3894)
DNA (450bp) protein (150aa)
Blue (Type 1) copper domain-containing protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1D0_9GAMM
Blue (Type 1) copper domain-containing protein {ECO:0000313|EMBL:EIL93271.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
azurin
scnpilot_solids1_trim150_scaffold_1743_curated_8
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4035..4358
DNA (324bp) protein (108aa)
Ferredoxin n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1D1_9GAMM
ferredoxin
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_1743_curated_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4554..6863
DNA (2310bp) protein (770aa)
Nitric-oxide reductase subunit B n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1D2_9GAMM
Nitric-oxide reductase subunit B {ECO:0000313|EMBL:EIL93273.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
nitric oxide reductase large subunit
scnpilot_solids1_trim150_scaffold_1743_curated_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6936..7937)
DNA (1002bp) protein (334aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
gapA; glyceraldehyde-3-phosphate dehydrogenase; K00134 glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12]
Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1D3_9GAMM
scnpilot_solids1_trim150_scaffold_1743_curated_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8159..8971
DNA (813bp) protein (271aa)
S1/P1 Nuclease n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1D4_9GAMM
S1/P1 Nuclease {ECO:0000313|EMBL:EIL93275.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
S1/P1 Nuclease
scnpilot_solids1_trim150_scaffold_1743_curated_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9051..10520
DNA (1470bp) protein (490aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Pyruvate kinase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1D5_9GAMM
pyruvate kinase
scnpilot_solids1_trim150_scaffold_1743_curated_13
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10615..11061
DNA (447bp) protein (149aa)
TonB family protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1D6_9GAMM
TonB family protein {ECO:0000313|EMBL:EIL93277.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Gram-negative bacterial tonB protein
scnpilot_solids1_trim150_scaffold_1743_curated_14
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11205..11276
DNA (72bp) protein (24aa)
UvrABC system protein B n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VXC8_9GAMM
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Excinuclease ABC subunit B
Displaying 14 items

View Taxonomy