ggKbase home page

scnpilot_solids1_trim150_scaffold_229_curated_14

Organism: solids_Rhodanobacter_5

partial RP 37 / 55 MC: 2 BSCG 37 / 51 MC: 2 ASCG 10 / 38
Location: comp(14573..15751)

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 392.0
  • Bit_score: 762
  • Evalue 2.30e-217
3-isopropylmalate dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXX8_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 392.0
  • Bit_score: 762
  • Evalue 1.70e-217
3-isopropylmalate dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 83.4
  • Coverage: 392.0
  • Bit_score: 625
  • Evalue 1.30e-176

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1179
ATGAAGGCACGTATCGTCACCCTGCCCGGCGATGGCGTCGGCCCCGAGGTCACCGCCGCCGCGGTGGCCGTGTTGCATGCCGTGGCCGCGCGCTACGGGCACGAGTTCGTCTTCGACGAGCAGCTGATCGGCGGCGGCGCCATCGATGCCACCGGCGAGCCGCTGCCGTCCGCTTCGCTGGCGGCGTGCCAGGCCGCCGACGCCGTGCTGCTGGGCGCCGTGGGCGGCCCGAAGTGGTCGGACCCGAACGCGCCGGTTCGACCCGAGCAGGGCCTGCTGGCCTTGCGTGCCGCGCTCGGCGTGTACGCGAACCTGCGGCCGCTGCAGGTGCATCCTTCGCTGGCCAACCTGTCGCCGCTGAAGAACGACCGGCTCCGGCATGTCGACGTGCTGTTCGTGCGCGAGCTTACCGGCGGCATGTACTTCGGCGCACGCACGCGCAGCGCCGACGCCGCCACCGACGAGTGCAGGTACACCGTGGCCGAGATCGAGCGCGTGGTGCGCCGCGCCTTCGAGCTGGCCCGCGATCGCCGCCGCCACGTCACCTCGGTCGACAAGGCCAACGTGCTGGAGACCTCTCGGCTGTGGCGTAGCACGGTGCAGCGCATCGCCGCCGACTACCCCGAGGTGAAGCTCGAACACCAGCTGGTCGACTCGATGGCGATGCTGCTGCTGACCCGGCCGAACCGCTACGACGTGGTGGTCACCGAGAACCTGTTCGGCGACATCCTCACCGACGAGGCCGCCGCGCTGGCCGGCTCGCTGGGGCTGCTGCCGTCAGCGTCGCTTGGCGATCGAGCCCCCTCATCCGGCCCTGCGGGCCACCTTCTCCCGTCAACGGGAGAAGGGAGTTCGGTGCGGCCTGCGGCCGCCTCGACCCTCATGGGCCTGTACGAACCGATCCACGGCTCGGCCCCCGATATCGCCGGCCAAGGCGTGGCCAATCCGGTCGGCGCGATCCTCTCCGCCGCGCTGCTGCTGCGCCACTCGCTGCAGCTGGAGGCCGAGGCGGTCGCGATCGAGGCGGCAGTGGAGCAGGTGCTGCGGCACGGCCCGCACAGCCGCGACATCGGCGGACAGGCCGGCACTGCCGAGGTGCTCGATGCGGTGCTGGCCGCGATCGAGGATCACGCCGACAACGCCGCCGCGTTCTTCTGCGGAGCGCGCGCATGCGGCTGA
PROTEIN sequence
Length: 393
MKARIVTLPGDGVGPEVTAAAVAVLHAVAARYGHEFVFDEQLIGGGAIDATGEPLPSASLAACQAADAVLLGAVGGPKWSDPNAPVRPEQGLLALRAALGVYANLRPLQVHPSLANLSPLKNDRLRHVDVLFVRELTGGMYFGARTRSADAATDECRYTVAEIERVVRRAFELARDRRRHVTSVDKANVLETSRLWRSTVQRIAADYPEVKLEHQLVDSMAMLLLTRPNRYDVVVTENLFGDILTDEAAALAGSLGLLPSASLGDRAPSSGPAGHLLPSTGEGSSVRPAAASTLMGLYEPIHGSAPDIAGQGVANPVGAILSAALLLRHSLQLEAEAVAIEAAVEQVLRHGPHSRDIGGQAGTAEVLDAVLAAIEDHADNAAAFFCGARACG*