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scnpilot_solids1_trim150_scaffold_229_curated_15

Organism: solids_Rhodanobacter_5

partial RP 37 / 55 MC: 2 BSCG 37 / 51 MC: 2 ASCG 10 / 38
Location: comp(15748..16329)

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.0
  • Coverage: 193.0
  • Bit_score: 393
  • Evalue 2.40e-106
3-isopropylmalate dehydratase small subunit n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXX9_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 99.0
  • Coverage: 193.0
  • Bit_score: 393
  • Evalue 1.70e-106
3-isopropylmalate dehydratase, small subunit similarity KEGG
DB: KEGG
  • Identity: 88.6
  • Coverage: 193.0
  • Bit_score: 359
  • Evalue 8.60e-97

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 582
ATGAAACCCGTCACCCATATTCAATCCCGCACCGCCGTGCTGCCCGACGAGAACATCGACACCGATCGCATCATACCGGCGCGCTTCCTCACCACCACCACGCGCGAGGGACTGGGCCAGCTGTGCTTCCACGACTGGCGCTACCAGGCCGATGGCAGCGACAACCCGGCCTTCCCGCTGAACCGGCCGGAGGCGCGCGGCCGCTCGATCCTCGTCGCCGGGCGCAATTTCGGCTGCGGCTCCTCGCGCGAACACGCGCCGTGGGCATTGCTCGATTACGGCATCCGCGCGGTGCTGTGCAGCGAGATCGCGGACATCTTCCGCGGCAACGCGCTGAAGAACGGCCTGCTCGCCATCGTCATCGACGAACTGGAGCACCGCTGGCTGCTCAAGCATCCGGGCATCGAACTGGCGATCGATGTGCGCGAACAGTTCATCGCCCTGCCCGACGGCGGCCGCATCCCGTTCCGCCTGGAGCCGTTCGCGCGGCATTGCCTGCTCAACGGCGTCGACCAGCTCGGCTATCTGCTGCAGCACGAAAAGGCGATCGCCCATTACGAACAACAGGAGCAAGCAGCATGA
PROTEIN sequence
Length: 194
MKPVTHIQSRTAVLPDENIDTDRIIPARFLTTTTREGLGQLCFHDWRYQADGSDNPAFPLNRPEARGRSILVAGRNFGCGSSREHAPWALLDYGIRAVLCSEIADIFRGNALKNGLLAIVIDELEHRWLLKHPGIELAIDVREQFIALPDGGRIPFRLEPFARHCLLNGVDQLGYLLQHEKAIAHYEQQEQAA*