ggKbase home page

scnpilot_solids1_trim150_scaffold_682_curated_25

Organism: solids_Rhodanobacter_5

partial RP 37 / 55 MC: 2 BSCG 37 / 51 MC: 2 ASCG 10 / 38
Location: 23078..23431

Top 3 Functional Annotations

Value Algorithm Source
Type IV pilus assembly PilZ n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6I2_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 117.0
  • Bit_score: 231
  • Evalue 5.20e-58
Type IV pilus assembly PilZ {ECO:0000313|EMBL:EIL95073.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 117.0
  • Bit_score: 231
  • Evalue 7.30e-58
Tfp pilus assembly protein PilZ similarity KEGG
DB: KEGG
  • Identity: 94.9
  • Coverage: 117.0
  • Bit_score: 223
  • Evalue 3.40e-56

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 354
ATGAAACCCATGGGCGCCCGGCAGGGCATCATCTCGCTGAAAATCAAGGATGCGGCGTCGCTGTACAACGCGTACATGCCGTTCCTCAAGCACGGCGGCCTGTTTGCGGCCACTGCGCAGTCCTATTCGCTGGGCGACGAGGTGGTCCTGCTGGTGACCCTGGCGGAGGAAACCGAGCGCATCTCGGTGGTCGGCAAGGTGGTCTGGGTCAGTCCGGTCGGCGCCCAGGGCAATCGGACTGCCGGCATCGGCATCCACTTCAACGAGTCGGGCGATGCGGAAGCCGCCCGCAGCCGGATTGAGAACATCCTGGCCGGCACCCTCAACTCCGAGCGCCCCACCCACACGATGTGA
PROTEIN sequence
Length: 118
MKPMGARQGIISLKIKDAASLYNAYMPFLKHGGLFAATAQSYSLGDEVVLLVTLAEETERISVVGKVVWVSPVGAQGNRTAGIGIHFNESGDAEAARSRIENILAGTLNSERPTHTM*