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scnpilot_solids1_trim150_scaffold_682_curated

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_682_curated_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..1328
DNA (1326bp) protein (442aa)
DNA polymerase III subunits gamma and tau {ECO:0000313|EMBL:EIL95049.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EIL95049.1};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
DNA polymerase III subunits gamma and tau n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6F8_9GAMM
DNA polymerase III, subunit gamma/tau
scnpilot_solids1_trim150_scaffold_682_curated_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1328..1651
DNA (324bp) protein (108aa)
Nucleoid-associated protein UU7_02777 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6F9_9GAMM
Nucleoid-associated protein UU7_02777 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
DNA-binding protein, YbaB/EbfC family
scnpilot_solids1_trim150_scaffold_682_curated_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1760..2359
DNA (600bp) protein (200aa)
Recombination protein RecR n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6G0_9GAMM
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
DNA replication and repair protein RecR
scnpilot_solids1_trim150_scaffold_682_curated_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2384..2728
DNA (345bp) protein (115aa)
HIT family hydrolase, diadenosine tetraphosphate hydrolase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6G1_9GAMM
HIT family hydrolase, diadenosine tetraphosphate hydrolase {ECO:0000313|EMBL:EIL95052.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
HIT family hydrolase, diadenosine tetraphosphate hydrolase
scnpilot_solids1_trim150_scaffold_682_curated_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2777..3358)
DNA (582bp) protein (194aa)
Starvation-inducible outer membrane lipoprotein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6G2_9GAMM
Starvation-inducible outer membrane lipoprotein {ECO:0000313|EMBL:EIL95053.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
starvation-inducible outer membrane lipoprotein
scnpilot_solids1_trim150_scaffold_682_curated_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3407..5371)
DNA (1965bp) protein (655aa)
Transglutaminase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6G3_9GAMM
Transglutaminase {ECO:0000313|EMBL:EIL95054.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
transglutaminase-like enzyme, predicted cysteine protease
scnpilot_solids1_trim150_scaffold_682_curated_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5368..6321)
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6G4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL95055.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_682_curated_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6321..7253)
DNA (933bp) protein (311aa)
MoxR-like ATPase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6G5_9GAMM
MoxR-like ATPase {ECO:0000313|EMBL:EIL95056.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
MoxR-like ATPase
scnpilot_solids1_trim150_scaffold_682_curated_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7333..7929)
DNA (597bp) protein (199aa)
Maf-like protein UU7_02812 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6G6_9GAMM
Maf-like protein UU7_02812 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
MAF protein
scnpilot_solids1_trim150_scaffold_682_curated_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7926..8411)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6G7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL95058.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_682_curated_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8564..9037
DNA (474bp) protein (158aa)
Putative metal-binding protein, possibly nucleic-acid binding protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6G8_9GAMM
Putative metal-binding protein, possibly nucleic-acid binding protein {ECO:0000313|EMBL:EIL95059.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative metal-binding protein, possibly nucleic-acid binding protein
scnpilot_solids1_trim150_scaffold_682_curated_12
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


9101..9295
DNA (195bp) protein (65aa)
50S ribosomal protein L32 n=2 Tax=Rhodanobacter RepID=I4VP07_9GAMM
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
LSU ribosomal protein L32P
scnpilot_solids1_trim150_scaffold_682_curated_13
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9453..10427
DNA (975bp) protein (325aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6H0_9GAMM
3-oxoacyl-(acyl-carrier-protein) synthase III
scnpilot_solids1_trim150_scaffold_682_curated_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10527..11519
DNA (993bp) protein (331aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6H1_9GAMM
malonyl CoA-acyl carrier protein transacylase
scnpilot_solids1_trim150_scaffold_682_curated_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11559..12302
DNA (744bp) protein (248aa)
3-ketoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:EIL95063.1}; EC=1.1.1.100 {ECO:0000313|EMBL:EIL95063.1};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100)
3-ketoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6H2_9GAMM
scnpilot_solids1_trim150_scaffold_682_curated_16
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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12500..12739
DNA (240bp) protein (80aa)
Acyl carrier protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6H3_9GAMM
acyl carrier protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_682_curated_17
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12982..14220
DNA (1239bp) protein (413aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
3-oxoacyl-(acyl-carrier-protein) synthase II (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6H4_9GAMM
scnpilot_solids1_trim150_scaffold_682_curated_18
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14231..15577
DNA (1347bp) protein (449aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6H5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL95066.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
anthranilate/para-aminobenzoate synthase component I
scnpilot_solids1_trim150_scaffold_682_curated_19
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15577..16404
DNA (828bp) protein (276aa)
4-amino-4-deoxychorismate lyase {ECO:0000313|EMBL:EIL95067.1}; EC=4.1.3.38 {ECO:0000313|EMBL:EIL95067.1};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
aminodeoxychorismate lyase apoprotein (EC:4.1.3.38)
4-amino-4-deoxychorismate lyase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6H6_9GAMM
scnpilot_solids1_trim150_scaffold_682_curated_20
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16401..17435
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6H7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL95068.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_682_curated_21
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17432..18070
DNA (639bp) protein (213aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
thymidylate kinase (EC:2.7.4.9)
Thymidylate kinase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6H8_9GAMM
scnpilot_solids1_trim150_scaffold_682_curated_22
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18067..19002
DNA (936bp) protein (312aa)
DNA polymerase III subunit delta {ECO:0000313|EMBL:EIL95070.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EIL95070.1};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
DNA polymerase III subunit delta n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6H9_9GAMM
DNA polymerase III, delta'' subunit
scnpilot_solids1_trim150_scaffold_682_curated_23
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18999..19952
DNA (954bp) protein (318aa)
Putative LmbE-like protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6I0_9GAMM
Putative LmbE-like protein {ECO:0000313|EMBL:EIL95071.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative LmbE-like protein
scnpilot_solids1_trim150_scaffold_682_curated_24
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20144..22993
DNA (2850bp) protein (950aa)
Diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6I1_9GAMM
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:EIL95072.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein
scnpilot_solids1_trim150_scaffold_682_curated_25
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23078..23431
DNA (354bp) protein (118aa)
Type IV pilus assembly PilZ n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6I2_9GAMM
Type IV pilus assembly PilZ {ECO:0000313|EMBL:EIL95073.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Tfp pilus assembly protein PilZ
scnpilot_solids1_trim150_scaffold_682_curated_26
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23537..24073
DNA (537bp) protein (179aa)
NADH:ubiquinone oxidoreductase subunit 3 (chain A) (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit A n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6I3_9GAMM
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_682_curated_27
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24064..24414
DNA (351bp) protein (117aa)
NADH-quinone oxidoreductase subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01356};; NADH dehydrogenase I subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; NDH-1 subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
NADH dehydrogenase subunit B (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit B n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6I4_9GAMM
Displaying 27 items

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