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scnpilot_solids1_trim150_scaffold_240_curated_17

Organism: solids_Rhodanobacter_5

partial RP 37 / 55 MC: 2 BSCG 37 / 51 MC: 2 ASCG 10 / 38
Location: comp(21678..22943)

Top 3 Functional Annotations

Value Algorithm Source
Protein Wzt n=1 Tax=Rhodanobacter sp. 115 RepID=I4VJL7_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 80.1
  • Coverage: 407.0
  • Bit_score: 672
  • Evalue 3.20e-190
Protein Wzt {ECO:0000313|EMBL:EIL87408.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.1
  • Coverage: 407.0
  • Bit_score: 672
  • Evalue 4.40e-190
wzt; ABC subunit of A-band LPS efflux transporter; K09691 lipopolysaccharide transport system ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 66.2
  • Coverage: 423.0
  • Bit_score: 575
  • Evalue 1.30e-161

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Taxonomy

Rhodanobacter sp. 115 → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1266
ATGGGCGACGTCCGCGTCAACGGTTTGGGCAAGGCCTACAAGCAATATCCGGGTCAGTGGTCGCGATTGGCCGAGTGGATTTTGCCTGCAGGCAAGCCGCGCCACATCGAGCACTGGGTGCTGAAGGACATCGACTTCCATCTGCGCGCCGGCGAGGCGGTGGGTATCGTCGGTGCCAACGGCGCCGGCAAGAGCACTCTGCTGAAGATGCTCGCCGGCACCGTGCGCCCCAGTTGCGGCGAGATCACGATTGGCGGGCGCGTGGCTGCCATGCTGGAGCTTGGCATGGGTTTCCATCCCGATTTCACAGGACGGCAGAACGCGGTGATGGGTGGCCAGTTGCTGGGGCTGTCGCTGGAAGAGATTGCCCAGCTGATGCCGCACATCGAGGCCTTTGCCGAGATCGGCGAATACATCGACCAGCCGGTGCGCACTTATTCCAGCGGCATGCAAATGCGGCTGGCCTTCAGCGTGGCGACCGCCCAGCGACCGGATATCCTGATTGTCGATGAGGCACTCTCGGTGGGCGACTCGTACTTTCAGCACAAGAGTTTCGAGCGCATCCGCGAGTTCCGGCGCGAGGGCACCACCTTGCTGATCGTTTCGCACGATCGCTATGCCATCCAGACTGTCTGCGACCGCGCCATCCTGATGGACGCCGGTCGCATCCGCATGCAGGGATTACCCGTCGACGTACTGGATTACTACAACGCCATGATGGCCGAACAAAACCACCACAGGATCCAGCAGAAAACCCTCGCCGACGGCCGGGTTACCACCATATCCGGATCGGGTGAGGCCAGCATTGTCGATGTGCGCCTGCTCAACCAGTACGATCGTCCCGCCGATACCGTGGAGGTTGGCGAACCACTTCGCCTGCAAGTTCGTGTAAGAGTGAACTCGGCATTGCCGCGGTTGGTACTCGGTTTCCTGGTCAAGGATCGCCTCGGCCAAGCGATCTATGGCATCAACACGCACCGCCTCGAACAGCCCCTGGAAGATATGGCCGCGGGAGAGGAAGCCACTTACTGCTTCAGCTTTCCGGCGCGGCTTGGCAAGGGCAGTTATTCCGTTTCATTGTCGCTGTCTCGTGAGGACTCTCATGTGGACAAGAACTTCGAATGGCGCGACAACGCATTGATCTTTCATGTATTCAATATCAACAAGGAGGACTTCGTGGGCAGCAGCTGGCTTGGCGCTGACGTGACGATCACACGCCATGGCATGGCATCAGGCGCCATACATCCAGTGCAAAGTCTCCCGTAA
PROTEIN sequence
Length: 422
MGDVRVNGLGKAYKQYPGQWSRLAEWILPAGKPRHIEHWVLKDIDFHLRAGEAVGIVGANGAGKSTLLKMLAGTVRPSCGEITIGGRVAAMLELGMGFHPDFTGRQNAVMGGQLLGLSLEEIAQLMPHIEAFAEIGEYIDQPVRTYSSGMQMRLAFSVATAQRPDILIVDEALSVGDSYFQHKSFERIREFRREGTTLLIVSHDRYAIQTVCDRAILMDAGRIRMQGLPVDVLDYYNAMMAEQNHHRIQQKTLADGRVTTISGSGEASIVDVRLLNQYDRPADTVEVGEPLRLQVRVRVNSALPRLVLGFLVKDRLGQAIYGINTHRLEQPLEDMAAGEEATYCFSFPARLGKGSYSVSLSLSREDSHVDKNFEWRDNALIFHVFNINKEDFVGSSWLGADVTITRHGMASGAIHPVQSLP*