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scnpilot_solids1_trim150_scaffold_240_curated

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_240_curated_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..270)
DNA (270bp) protein (90aa)
TonB-dependent receptor n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1F0_9GAMM
TonB-dependent receptor {ECO:0000313|EMBL:EIL93291.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
outer membrane receptor protein
scnpilot_solids1_trim150_scaffold_240_curated_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(321..2339)
DNA (2019bp) protein (673aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1F1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93292.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
sulfotransferase family protein
scnpilot_solids1_trim150_scaffold_240_curated_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2620..3690
DNA (1071bp) protein (357aa)
Rieske (2Fe-2S) domain-containing protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1F2_9GAMM
Rieske (2Fe-2S) domain-containing protein {ECO:0000313|EMBL:EIL93293.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ring-hydroxylating dioxygenase, large terminal subunit
scnpilot_solids1_trim150_scaffold_240_curated_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3739..5052
DNA (1314bp) protein (438aa)
Amino acid permease-associated protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1F3_9GAMM
Amino acid permease-associated protein {ECO:0000313|EMBL:EIL93294.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
amino acid transporter
scnpilot_solids1_trim150_scaffold_240_curated_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5058..7112
DNA (2055bp) protein (685aa)
NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1F4_9GAMM
NADH:flavin oxidoreductase/NADH oxidase {ECO:0000313|EMBL:EIL93295.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
NADH:flavin oxidoreductase
scnpilot_solids1_trim150_scaffold_240_curated_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7250..8869
DNA (1620bp) protein (540aa)
hypothetical protein; K00274 monoamine oxidase [EC:1.4.3.4]
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1F5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93296.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids1_trim150_scaffold_240_curated_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8955..10367)
DNA (1413bp) protein (471aa)
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1F6_9GAMM
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase {ECO:0000313|EMBL:EIL93297.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase
scnpilot_solids1_trim150_scaffold_240_curated_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10384..11319)
DNA (936bp) protein (312aa)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1F7_9GAMM
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:EIL93298.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids1_trim150_scaffold_240_curated_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11316..11873)
DNA (558bp) protein (186aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1F8_9GAMM
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:EIL93299.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids1_trim150_scaffold_240_curated_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11870..12760)
DNA (891bp) protein (297aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1F9_9GAMM
scnpilot_solids1_trim150_scaffold_240_curated_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12757..13806)
DNA (1050bp) protein (350aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1G0_9GAMM
scnpilot_solids1_trim150_scaffold_240_curated_12
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14046..15383
DNA (1338bp) protein (446aa)
Glycosyltransferase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VJL2_9GAMM
Glycosyltransferase {ECO:0000313|EMBL:EIL87403.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
wxcA; glycosyltransferase
scnpilot_solids1_trim150_scaffold_240_curated_13
unknown

Not on your lists

15424..15951
DNA (528bp) protein (176aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_240_curated_14
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15971..19714
DNA (3744bp) protein (1248aa)
Glycosyl transferase, group 1 n=1 Tax=Rhodanobacter sp. 115 RepID=I4VJL4_9GAMM
Glycosyl transferase, group 1 {ECO:0000313|EMBL:EIL87405.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
glycosyl transferase, group 1
scnpilot_solids1_trim150_scaffold_240_curated_15
Burkholderia multivorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19802..20836
DNA (1035bp) protein (345aa)
GDP-mannose 4,6-dehydratase; K01711 GDPmannose 4,6-dehydratase [EC:4.2.1.47]
GDP-mannose 4,6-dehydratase n=1 Tax=Duganella zoogloeoides RepID=UPI00035EBA60
GDP-D-mannose dehydratase {ECO:0000313|EMBL:KHS12405.1}; TaxID=87883 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia multivorans.;"
scnpilot_solids1_trim150_scaffold_240_curated_16
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20820..21713
DNA (894bp) protein (298aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VJL6_9GAMM
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:EIL87407.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
NAD-dependent epimerase/dehydratase
scnpilot_solids1_trim150_scaffold_240_curated_17
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21678..22943)
DNA (1266bp) protein (422aa)
Protein Wzt n=1 Tax=Rhodanobacter sp. 115 RepID=I4VJL7_9GAMM
Protein Wzt {ECO:0000313|EMBL:EIL87408.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
wzt; ABC subunit of A-band LPS efflux transporter; K09691 lipopolysaccharide transport system ATP-binding protein
scnpilot_solids1_trim150_scaffold_240_curated_18
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22943..23740)
DNA (798bp) protein (266aa)
O-antigen export system permease n=1 Tax=Rhodanobacter sp. 115 RepID=I4VJL8_9GAMM
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
wzm; O-antigen export system permease; K09690 lipopolysaccharide transport system permease protein
scnpilot_solids1_trim150_scaffold_240_curated_19
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23796..24641)
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VJL9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL87410.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
methyltransferase family protein
scnpilot_solids1_trim150_scaffold_240_curated_20
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24721..25941)
DNA (1221bp) protein (407aa)
O-antigen acetylase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VJM0_9GAMM
O-antigen acetylase {ECO:0000313|EMBL:EIL87411.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
acyltransferase
scnpilot_solids1_trim150_scaffold_240_curated_21
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25925..27229)
DNA (1305bp) protein (435aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VJM1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL87412.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
glycosyltransferase
scnpilot_solids1_trim150_scaffold_240_curated_22
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27226..28686)
DNA (1461bp) protein (487aa)
Glycosyltransferase n=2 Tax=Pseudomonas aeruginosa RepID=V4QIR5_PSEAI
hypothetical protein
Glycosyltransferase {ECO:0000313|EMBL:KFF33642.1}; TaxID=1262663 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa VRFPA01.;"
scnpilot_solids1_trim150_scaffold_240_curated_23
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28906..30072
DNA (1167bp) protein (389aa)
cystathionine beta-lyase/cystathionine gamma-synthase (EC:4.4.1.1)
Cystathionine beta-lyase/cystathionine gamma-synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1G9_9GAMM
Cystathionine beta-lyase/cystathionine gamma-synthase {ECO:0000313|EMBL:EIL93310.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids1_trim150_scaffold_240_curated_24
Achromobacter sp. RTa, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30196..30984
DNA (789bp) protein (263aa)
sugar ABC transporter permease n=1 Tax=Pseudomonas fluorescens RepID=UPI0003655A1E
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1532557 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp. RTa.;"
hypothetical protein; K09690 lipopolysaccharide transport system permease protein
scnpilot_solids1_trim150_scaffold_240_curated_25
Legionella fallonii, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30974..32311
DNA (1338bp) protein (446aa)
ABC transporter, ATP-binding protein n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4X4Y5_9BURK
ABC-type polysaccharide/polyol phosphate transport system, ATPase component {ECO:0000313|EMBL:CEG58985.1}; TaxID=1212491 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella fallonii LLAP-10.;"
polysaccharide/polyol phosphate ABC transporter ATPase
scnpilot_solids1_trim150_scaffold_240_curated_26
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32301..33062
DNA (762bp) protein (254aa)
Methyltransferase type 11 n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9RDB8_AMMDK
Ubiquinone biosynthesis O-methyltransferase {ECO:0000313|EMBL:CDM22493.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
type 11 methyltransferase
scnpilot_solids1_trim150_scaffold_240_curated_27
Marichromatium purpuratum, Marichromatium, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33101..35152
DNA (2052bp) protein (684aa)
Glycosyl transferase family 2 n=1 Tax=Marichromatium purpuratum 984 RepID=F9TYA5_MARPU
Glycosyl transferase {ECO:0000313|EMBL:AHF02593.1}; TaxID=765910 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Marichromatium.;" source="Marichromatium purpuratum 984.;"
glycosyl transferase family protein
scnpilot_solids1_trim150_scaffold_240_curated_28
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35149..36018
DNA (870bp) protein (290aa)
Glycosyl transferase family 2 n=1 Tax=uncultured bacterium RepID=K2GGM5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDM22495.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
family 2 glycosyl transferase
scnpilot_solids1_trim150_scaffold_240_curated_29
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36015..37157
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P6S3_AROAE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI06988.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
scnpilot_solids1_trim150_scaffold_240_curated_30
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37641..39527
DNA (1887bp) protein (629aa)
Putative transmembrane sulfatase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WBF4_9GAMM
Putative transmembrane sulfatase {ECO:0000313|EMBL:EIL96795.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
sulfatase
Displaying items 1-30 of 41 in total

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