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scnpilot_solids1_trim150_scaffold_599_curated_27

Organism: solids_Rhodanobacter_5

partial RP 37 / 55 MC: 2 BSCG 37 / 51 MC: 2 ASCG 10 / 38
Location: comp(23314..24771)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-54 factor n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4T6_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 97.9
  • Coverage: 485.0
  • Bit_score: 924
  • Evalue 5.30e-266
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.9
  • Coverage: 485.0
  • Bit_score: 924
  • Evalue 7.50e-266
RNA polymerase, sigma 54 subunit, RpoN/SigL similarity KEGG
DB: KEGG
  • Identity: 89.0
  • Coverage: 489.0
  • Bit_score: 839
  • Evalue 4.20e-241

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1458
ATGAAACCCGCACTGCAGTTTCGCCTCCACCAGCAGCTGACGCTGACGCCGCAATTGCAGCAGGCCATACGCCTGCTGCAGCTGTCGCAACTGGAACTGGAAACCGAATTGCGGCAGATCGCCGAGAGCAACCCGTTGCTGGAGTTTGCCGAGGAAGTCGAGGACGAGGAAGCGCCCGAAGTCGGCGAGGCCGAATTCGACTACCCCAGCGTCGAGGCGGTGGCCACGGCCGGCAGCAACGACGAGGGCGAAAGCAGCGAGTGGGCTGACGGCGGCGGCACGGCGGAAGCGCCCATCGACTTCTCCGGCAGCAGCTCGGGCAGCAGCTCCGGCTCGCGTGGCGACGACGACTTCGAGCCGCAGAGCGTCGCGCCGGAAACGCTGCAGCAACACCTGCTGTGGCAGCTCAACCTTGCCTCGTTCAACCCGCGCCAGCACCTGATCGCCACGGTGCTGATCGACGCGCTGAACCCCGCCGGCTACCTGGCCGAGGGTCTCGATGCGGTCATCGCCGCCCTGCCCGCCGGTTTCGATGCCAGCATGATCGAGATCGAGACCGTGCGCCGCCAGTTGCAGGGATTCGACCCCACCGGCGTGGCCAGCCTCGACCTGCGCGACTGCCTGCGCGTGCAGCTGGAACAGTTCGATGCCGCCACGCCGCAGCGCGAACTGGCGCTGCAGATCGTGGACAGCGAGCTGGACCTGCTGGCCCGCAACGACATCGCCCGGCTGGCCCGGCGGCTGCGCGCCAGCGAGGACGACGTGGCCGAGGCGGCGATATTGATCCGCAGCCTGGACCCGCGCCCCGGCGCCGCGCTGGACACCACGCCGGTGGAATACGTGGCGCCGGACGTCTACGCCCTGCGCGACGGCCCCCGCTGGCGGGTCAGCCTGAATGCCGACGCGCAGCCGCGACTGGGCCTCAACCAGCACTACTGCGGGCTGATCGCCAAGGCGCGCGGCGAGGATGCCAGCTGGATGCGCGGCCAGCTGCAGGAAGCGCGCTGGCTGATCAAGAGCCTGGAATCGCGCGCCGAGACGCTGCTGAAAGTGGCCGACGCGATCGTGCGGCGGCAAAGCGCCTTCCTCGACTATGGCCCCGAGGCGATGCACCCGCTGGTGCTGCGCGAAGTGGCCGAGGAGGTCGGCATGCACGAATCGACCATCTCGCGGGTCACCACGCGTAAGTACCTGCACACCCCGCGCGGCACCTTCGAGCTGAAATACTTCTTTTCCAGCGGCGTATCCACCGAGGACGGCGGCAGCGCCTCGGCCACCGCCATCCAGGCCATGCTGCGCAAACTCATCGACGCCGAAGACGTGCGCAAGCCGTTGTCCGACCTCGCCATCGCAGAGGAGCTCAAGCGCAAGGGCATCCAGGTTGCCCGTCGCACCGTCGCCAAGTACCGGGAAGGCCTGCGCATCCCCACCTCCAGCGAGCGCCAGCGCGCGGGCTGA
PROTEIN sequence
Length: 486
MKPALQFRLHQQLTLTPQLQQAIRLLQLSQLELETELRQIAESNPLLEFAEEVEDEEAPEVGEAEFDYPSVEAVATAGSNDEGESSEWADGGGTAEAPIDFSGSSSGSSSGSRGDDDFEPQSVAPETLQQHLLWQLNLASFNPRQHLIATVLIDALNPAGYLAEGLDAVIAALPAGFDASMIEIETVRRQLQGFDPTGVASLDLRDCLRVQLEQFDAATPQRELALQIVDSELDLLARNDIARLARRLRASEDDVAEAAILIRSLDPRPGAALDTTPVEYVAPDVYALRDGPRWRVSLNADAQPRLGLNQHYCGLIAKARGEDASWMRGQLQEARWLIKSLESRAETLLKVADAIVRRQSAFLDYGPEAMHPLVLREVAEEVGMHESTISRVTTRKYLHTPRGTFELKYFFSSGVSTEDGGSASATAIQAMLRKLIDAEDVRKPLSDLAIAEELKRKGIQVARRTVAKYREGLRIPTSSERQRAG*