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scnpilot_solids1_trim150_scaffold_599_curated

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Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_599_curated_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

124..492
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4R1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94452.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
lactoylglutathione lyase family protein
scnpilot_solids1_trim150_scaffold_599_curated_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

525..962
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4R2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94453.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_599_curated_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1044..2168
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4R3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94454.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_599_curated_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2253..3497)
DNA (1245bp) protein (415aa)
Major facilitator superfamily protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4R4_9GAMM
Major facilitator superfamily protein {ECO:0000313|EMBL:EIL94455.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
arabinose efflux permease family protein
scnpilot_solids1_trim150_scaffold_599_curated_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3687..4586)
DNA (900bp) protein (300aa)
AraC family transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4R5_9GAMM
AraC family transcriptional regulator {ECO:0000313|EMBL:EIL94456.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
AraC family transcriptional regulator
scnpilot_solids1_trim150_scaffold_599_curated_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4683..5426
DNA (744bp) protein (248aa)
Short-chain alcohol dehydrogenase-like protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4R6_9GAMM
Short-chain alcohol dehydrogenase-like protein {ECO:0000313|EMBL:EIL94457.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative short-chain dehydrogenase, oxidoreductase
scnpilot_solids1_trim150_scaffold_599_curated_7
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5562..5681)
DNA (120bp) protein (40aa)
LysR family transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4S0_9GAMM
LysR family transcriptional regulator {ECO:0000313|EMBL:EIL87793.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
transcriptional regulator
scnpilot_solids1_trim150_scaffold_599_curated_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5869..7020)
DNA (1152bp) protein (384aa)
Lipase class 3 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4R8_9GAMM
Lipase class 3 {ECO:0000313|EMBL:EIL94459.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative lipase family protein
scnpilot_solids1_trim150_scaffold_599_curated_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7059..7454)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4R9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94460.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_599_curated_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7868..8866)
DNA (999bp) protein (333aa)
LysR family transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4S0_9GAMM
LysR family transcriptional regulator {ECO:0000313|EMBL:EIL94461.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
transcriptional regulator
scnpilot_solids1_trim150_scaffold_599_curated_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8904..9293
DNA (390bp) protein (130aa)
Terminal quinol oxidase membrane protein subunit n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4S1_9GAMM
Terminal quinol oxidase membrane protein subunit {ECO:0000313|EMBL:EIL94462.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_599_curated_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9356..10168
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4S2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94463.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_599_curated_13
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10165..10869
DNA (705bp) protein (235aa)
Phospholipase/carboxylesterase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4S3_9GAMM
Phospholipase/carboxylesterase {ECO:0000313|EMBL:EIL94464.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative esterase
scnpilot_solids1_trim150_scaffold_599_curated_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10891..11565)
DNA (675bp) protein (225aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Signal peptidase I; K03100 signal peptidase I [EC:3.4.21.89]
Signal peptidase I n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4S4_9GAMM
scnpilot_solids1_trim150_scaffold_599_curated_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11851..13479
DNA (1629bp) protein (543aa)
ABC transporter ATP-binding protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4S5_9GAMM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EIL94466.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ABC transporter ATP-binding protein
scnpilot_solids1_trim150_scaffold_599_curated_16
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13642..14988
DNA (1347bp) protein (449aa)
Inner membrane protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4S6_9GAMM
Inner membrane protein {ECO:0000313|EMBL:EIL94467.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Inner membrane protein involved in colicin E2 resistance
scnpilot_solids1_trim150_scaffold_599_curated_17
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14985..15677
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4S7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94468.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
universal bacterial protein YeaZ
scnpilot_solids1_trim150_scaffold_599_curated_18
unknown

Not on your lists

comp(15775..16074)
DNA (300bp) protein (100aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_599_curated_19
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16163..17200)
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4S8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94469.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_599_curated_20
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17288..18181
DNA (894bp) protein (298aa)
Transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4S9_9GAMM
Transcriptional regulator {ECO:0000313|EMBL:EIL94470.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
transcriptional regulator
scnpilot_solids1_trim150_scaffold_599_curated_21
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18221..19990)
DNA (1770bp) protein (590aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
phosphoenolpyruvate--protein phosphotransferase (EC:2.7.3.9)
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4T0_9GAMM
scnpilot_solids1_trim150_scaffold_599_curated_22
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20136..20405)
DNA (270bp) protein (90aa)
Phosphotransferase system HPr enzyme n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4T1_9GAMM
Phosphotransferase system HPr enzyme {ECO:0000313|EMBL:EIL94472.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
phosphotransferase system HPr (HPr) family protein
scnpilot_solids1_trim150_scaffold_599_curated_23
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20414..20806)
DNA (393bp) protein (131aa)
Phosphotransferase system, mannose/fructose-specific component IIA n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4T2_9GAMM
Phosphotransferase system, mannose/fructose-specific component IIA {ECO:0000313|EMBL:EIL94473.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
phosphotransferase system, mannose/fructose-specific component IIA
scnpilot_solids1_trim150_scaffold_599_curated_24
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20845..21744)
DNA (900bp) protein (300aa)
UPF0042 nucleotide-binding protein UU7_04297 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4T3_9GAMM
Nucleotide-binding protein UU7_04297 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative P-loop-containing kinase
scnpilot_solids1_trim150_scaffold_599_curated_25
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21749..22651)
DNA (903bp) protein (301aa)
HPr kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058411}; Short=HPrK/P {ECO:0000256|HAMAP-Rule:MF_01249};; EC=2.7.11.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058427};; EC=2.7.4.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058435};; HPr(Ser) kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathi
serine kinase of the HPr protein, regulates carbohydrate metabolism (EC:2.7.1.-)
HPr kinase/phosphorylase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4T4_9GAMM
scnpilot_solids1_trim150_scaffold_599_curated_26
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22845..23168)
DNA (324bp) protein (108aa)
Ribosomal subunit interface protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4T5_9GAMM
Ribosomal subunit interface protein {ECO:0000313|EMBL:EIL94476.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ribosomal subunit interface protein
scnpilot_solids1_trim150_scaffold_599_curated_27
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23314..24771)
DNA (1458bp) protein (486aa)
RNA polymerase sigma-54 factor n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4T6_9GAMM
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
RNA polymerase, sigma 54 subunit, RpoN/SigL
scnpilot_solids1_trim150_scaffold_599_curated_28
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24869..25588)
DNA (720bp) protein (240aa)
ABC transporter ATPase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4T7_9GAMM
ABC transporter ATPase {ECO:0000313|EMBL:EIL94478.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ABC-type (unclassified) transport system, ATPase component
scnpilot_solids1_trim150_scaffold_599_curated_29
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25592..26185)
DNA (594bp) protein (198aa)
Lipopolysaccharide transport periplasmic protein LptA n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4T8_9GAMM
Lipopolysaccharide transport periplasmic protein LptA {ECO:0000313|EMBL:EIL94479.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
lipopolysaccharide transport periplasmic protein LptA
scnpilot_solids1_trim150_scaffold_599_curated_30
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26148..26744)
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4T9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94480.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
Displaying items 1-30 of 49 in total

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