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scnpilot_solids1_trim150_scaffold_992_curated

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_992_curated_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..364
DNA (363bp) protein (121aa)
Quinolinate synthase {ECO:0000256|SAAS:SAAS00096027}; EC=2.5.1.72 {ECO:0000256|SAAS:SAAS00096027};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
quinolinate synthetase (EC:2.5.1.72)
Quinolinate synthetase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0N5_9GAMM
scnpilot_solids1_trim150_scaffold_992_curated_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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361..1806
DNA (1446bp) protein (482aa)
L-aspartate oxidase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0N6_9GAMM
L-aspartate oxidase {ECO:0000313|EMBL:EIL93027.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
aspartate oxidase
scnpilot_solids1_trim150_scaffold_992_curated_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1928..2443
DNA (516bp) protein (172aa)
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase {ECO:0000256|HAMAP-Rule:MF_00405, ECO:0000256|SAAS:SAAS00064161}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00405, ECO:0000256|SAAS:SAAS00064166};; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA {ECO:0000256|HAMAP-Rule:MF_00405}; Beta-hydroxydecanoyl thioester dehydrase {ECO:0000256|HAMAP-Rule:MF_00405}; Trans-2-decenoyl-[acyl-carrier-protein] isomerase {ECO:0000256|HAMAP-Rule:MF_00405}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobact
beta-hydroxyacyl-(acyl carrier protein) dehydratase FabA (EC:4.2.1.59)
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0N7_9GAMM
scnpilot_solids1_trim150_scaffold_992_curated_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2445..3653
DNA (1209bp) protein (403aa)
3-oxoacyl-(acyl-carrier-protein) synthase (EC:2.3.1.41)
Beta-ketoacyl-[ACP] synthase I n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0N8_9GAMM
Beta-ketoacyl-[ACP] synthase I {ECO:0000313|EMBL:EIL93029.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids1_trim150_scaffold_992_curated_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3713..4372
DNA (660bp) protein (220aa)
Hemolysin III family channel protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0N9_9GAMM
Hemolysin III family channel protein {ECO:0000313|EMBL:EIL93030.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
channel protein, hemolysin III family
scnpilot_solids1_trim150_scaffold_992_curated_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4448..5197
DNA (750bp) protein (250aa)
Deoxyribose-phosphate aldolase {ECO:0000256|SAAS:SAAS00058202}; EC=4.1.2.4 {ECO:0000256|SAAS:SAAS00058202};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Deoxyribose-phosphate aldolase n=1 Tax=Rhodanobacter denitrificans RepID=I4WYJ1_9GAMM
deoxyribose-phosphate aldolase
scnpilot_solids1_trim150_scaffold_992_curated_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5194..6528
DNA (1335bp) protein (445aa)
thymidine phosphorylase (EC:2.4.2.4)
Thymidine phosphorylase {ECO:0000313|EMBL:AGG89986.1}; EC=2.4.2.4 {ECO:0000313|EMBL:AGG89986.1};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Thymidine phosphorylase n=1 Tax=Rhodanobacter denitrificans RepID=M4NQY8_9GAMM
scnpilot_solids1_trim150_scaffold_992_curated_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6525..7733
DNA (1209bp) protein (403aa)
Phosphopentomutase {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00010015}; EC=5.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00009998};; Phosphodeoxyribomutase {ECO:0000256|HAMAP-Rule:MF_00740}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Phosphopentomutase n=1 Tax=Rhodanobacter denitrificans RepID=M4NGD7_9GAMM
phosphopentomutase
scnpilot_solids1_trim150_scaffold_992_curated_9
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7744..8460
DNA (717bp) protein (239aa)
Purine nucleoside phosphorylase DeoD-type {ECO:0000256|HAMAP-Rule:MF_01627}; Short=PNP {ECO:0000256|HAMAP-Rule:MF_01627};; EC=2.4.2.1 {ECO:0000256|HAMAP-Rule:MF_01627};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Purine nucleoside phosphorylase DeoD-type n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WTW1_9GAMM
purine-nucleoside phosphorylase, DeoD family
scnpilot_solids1_trim150_scaffold_992_curated_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8475..9359)
DNA (885bp) protein (295aa)
Putative protease n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0P0_9GAMM
Putative protease {ECO:0000313|EMBL:EIL93031.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
collagenase-like protease
scnpilot_solids1_trim150_scaffold_992_curated_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9379..10377)
DNA (999bp) protein (333aa)
Putative protease n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0P1_9GAMM
Putative protease {ECO:0000313|EMBL:EIL93032.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
protease
scnpilot_solids1_trim150_scaffold_992_curated_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10465..11184
DNA (720bp) protein (240aa)
Cytochrome b/b6 domain protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0P2_9GAMM
Cytochrome b/b6 domain protein {ECO:0000313|EMBL:EIL93033.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
cytochrome B561
scnpilot_solids1_trim150_scaffold_992_curated_13
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11307..11801
DNA (495bp) protein (165aa)
DnrO protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0P3_9GAMM
DnrO protein {ECO:0000313|EMBL:EIL93034.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_992_curated_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11740..13287)
DNA (1548bp) protein (516aa)
3-octaprenyl-4hydroxybenzoate decarboxylase (EC:4.1.1.-); K03182 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD [EC:4.1.1.-]
UbiD family decarboxylase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0P4_9GAMM
UbiD family decarboxylase {ECO:0000313|EMBL:EIL93035.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids1_trim150_scaffold_992_curated_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13284..14090)
DNA (807bp) protein (269aa)
Prephenate dehydrogenase/chorismate mutase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0P5_9GAMM
Prephenate dehydrogenase/chorismate mutase {ECO:0000313|EMBL:EIL93036.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
prephenate dehydrogenase
scnpilot_solids1_trim150_scaffold_992_curated_16
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14087..15193)
DNA (1107bp) protein (369aa)
Pyridoxal-5'-phosphate-dependent protein subunit beta n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0P6_9GAMM
Pyridoxal-5'-phosphate-dependent protein subunit beta {ECO:0000313|EMBL:EIL93037.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
cysteine synthase
scnpilot_solids1_trim150_scaffold_992_curated_17
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15208..17160)
DNA (1953bp) protein (651aa)
Pyridoxal-dependent decarboxylase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0P7_9GAMM
Pyridoxal-dependent decarboxylase {ECO:0000313|EMBL:EIL93038.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
PLP-dependent enzyme, glutamate decarboxylase
scnpilot_solids1_trim150_scaffold_992_curated_18
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17157..17567)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0P8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93039.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_992_curated_19
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17648..19930)
DNA (2283bp) protein (761aa)
Nitric-oxide reductase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0P9_9GAMM
Nitric-oxide reductase {ECO:0000313|EMBL:EIL93040.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
nitric oxide reductase large subunit
scnpilot_solids1_trim150_scaffold_992_curated_20
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20211..21059)
DNA (849bp) protein (283aa)
UspA domain-containing protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0Q0_9GAMM
UspA domain-containing protein {ECO:0000313|EMBL:EIL93041.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
universal stress protein UspA-like protein
scnpilot_solids1_trim150_scaffold_992_curated_21
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21085..21654)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0Q1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93042.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
sortase-like acyltransferase
scnpilot_solids1_trim150_scaffold_992_curated_22
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21804..22568)
DNA (765bp) protein (255aa)
Crp/Fnr family transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0Q2_9GAMM
Crp/Fnr family transcriptional regulator {ECO:0000313|EMBL:EIL93043.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
cAMP-binding protein
scnpilot_solids1_trim150_scaffold_992_curated_23
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22724..24115)
DNA (1392bp) protein (464aa)
RNA-metabolising metallo-beta-lactamase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0Q3_9GAMM
RNA-metabolising metallo-beta-lactamase {ECO:0000313|EMBL:EIL93044.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative exonuclease of the beta-lactamase fold involved in RNA processing
scnpilot_solids1_trim150_scaffold_992_curated_24
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24280..24552
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0Q4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93045.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_992_curated_25
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24582..25178
DNA (597bp) protein (199aa)
Cytochrome B561 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0Q5_9GAMM
Cytochrome B561 {ECO:0000313|EMBL:EIL93046.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
cytochrome b
scnpilot_solids1_trim150_scaffold_992_curated_26
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25183..25587
DNA (405bp) protein (135aa)
Two component transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0Q6_9GAMM
Two component transcriptional regulator {ECO:0000313|EMBL:EIL93047.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Displaying 26 items

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