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scnpilot_solids1_trim150_scaffold_944_curated

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Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_944_curated_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..751
DNA (750bp) protein (250aa)
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains n=1 Tax=Rhodanobacter denitrificans RepID=M4NEB9_9GAMM
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains {ECO:0000313|EMBL:AGG87858.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_944_curated_2
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(762..2018)
DNA (1257bp) protein (419aa)
Antimicrobial peptide ABC transporter permease n=1 Tax=Rhodanobacter denitrificans RepID=I4WZJ7_9GAMM
ABC-type antimicrobial peptide transport system, permease component
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_944_curated_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2027..3391)
DNA (1365bp) protein (455aa)
Antimicrobial peptide ABC transporter permease n=1 Tax=Rhodanobacter denitrificans RepID=I4WZJ8_9GAMM
ABC-type antimicrobial peptide transport system, permease component
ABC-type antimicrobial peptide transport system, permease component {ECO:0000313|EMBL:AGG87856.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_944_curated_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3388..4926)
DNA (1539bp) protein (513aa)
Signal transduction histidine kinase n=1 Tax=Rhodanobacter denitrificans RepID=I4WZJ9_9GAMM
signal transduction histidine kinase
Signal transduction histidine kinase {ECO:0000313|EMBL:AGG87855.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_944_curated_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5030..5476)
DNA (447bp) protein (149aa)
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Rhodanobacter denitrificans RepID=I4WZK0_9GAMM
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain {ECO:0000313|EMBL:AGG87854.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_944_curated_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5486..7267)
DNA (1782bp) protein (594aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
PAS domain S-box n=2 Tax=Rhodanobacter denitrificans RepID=M4NEB5_9GAMM
PAS domain S-box
scnpilot_solids1_trim150_scaffold_944_curated_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7373..9676)
DNA (2304bp) protein (768aa)
Alpha-1,2-mannosidase family protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WZK2_9GAMM
alpha-1,2-mannosidase, putative
Alpha-1,2-mannosidase, putative {ECO:0000313|EMBL:AGG87852.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_944_curated_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9842..11182
DNA (1341bp) protein (447aa)
L-fucose:H+ symporter permease n=1 Tax=Rhodanobacter denitrificans RepID=I4WZK3_9GAMM
L-fucose:H+ symporter permease
L-fucose:H+ symporter permease {ECO:0000313|EMBL:AGG87851.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_944_curated_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11184..12164
DNA (981bp) protein (327aa)
Sugar kinase n=1 Tax=Rhodanobacter denitrificans RepID=I4WZK4_9GAMM
sugar kinase, ribokinase
Sugar kinase, ribokinase {ECO:0000313|EMBL:AGG87850.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_944_curated_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12161..13387
DNA (1227bp) protein (409aa)
N-acyl-D-glucosamine 2-epimerase n=1 Tax=Rhodanobacter denitrificans RepID=I4WZK5_9GAMM
N-acyl-D-glucosamine 2-epimerase
N-acyl-D-glucosamine 2-epimerase {ECO:0000313|EMBL:AGG87849.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_944_curated_11
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13413..15383
DNA (1971bp) protein (657aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WAR1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL96552.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
aminopeptidase N
scnpilot_solids1_trim150_scaffold_944_curated_12
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15408..17567)
DNA (2160bp) protein (720aa)
Outer membrane receptor protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPU5_9GAMM
Outer membrane receptor protein {ECO:0000313|EMBL:EIM01487.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
outer membrane receptor protein; K02014 iron complex outermembrane recepter protein
scnpilot_solids1_trim150_scaffold_944_curated_13
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17817..18254
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPU6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM01488.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_944_curated_14
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18247..19575
DNA (1329bp) protein (443aa)
L-sorbosone dehydrogenase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPU7_9GAMM
L-sorbosone dehydrogenase {ECO:0000313|EMBL:EIM01489.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
L-sorbosone dehydrogenase
scnpilot_solids1_trim150_scaffold_944_curated_15
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19747..21513)
DNA (1767bp) protein (589aa)
ABC transporter ATP-binding protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WZK8_9GAMM
ABC-type multidrug transport system, ATPase and permease component
ABC-type multidrug transport system, ATPase and permease component {ECO:0000313|EMBL:AGG87846.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_944_curated_16
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21748..22359)
DNA (612bp) protein (204aa)
Peroxiredoxin n=2 Tax=Rhodanobacter denitrificans RepID=M4NB53_9GAMM
Peroxiredoxin
Peroxiredoxin {ECO:0000313|EMBL:AGG87845.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_944_curated_17
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22499..23584)
DNA (1086bp) protein (362aa)
Serine kinase of the HPr protein, regulates carbohydrate metabolism n=3 Tax=Rhodanobacter denitrificans RepID=M4NB84_9GAMM
serine kinase of the HPr protein, regulates carbohydrate metabolism
Serine kinase of the HPr protein, regulates carbohydrate metabolism {ECO:0000313|EMBL:AGG87844.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_944_curated_18
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23781..25283
DNA (1503bp) protein (501aa)
Fe-S oxidoreductase n=1 Tax=Rhodanobacter denitrificans RepID=M4NEA6_9GAMM
Fe-S oxidoreductase
Fe-S oxidoreductase {ECO:0000313|EMBL:AGG87843.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_944_curated_19
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25258..26478
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WCQ7_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87842.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_944_curated_20
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26488..27447
DNA (960bp) protein (320aa)
Type 11 methyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WCQ8_9GAMM
methylase involved in ubiquinone/menaquinone biosynthesis
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:AGG87841.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_944_curated_21
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27423..28553)
DNA (1131bp) protein (377aa)
Glycosyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NB50_9GAMM
glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:AGG87840.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_944_curated_22
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28550..29677)
DNA (1128bp) protein (376aa)
Glycosyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WT51_9GAMM
glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:AGG87839.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_944_curated_23
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29691..31208)
DNA (1518bp) protein (506aa)
Radical SAM protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WT52_9GAMM
Fe-S oxidoreductase
Fe-S oxidoreductase {ECO:0000313|EMBL:AGG87838.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_944_curated_24
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31234..31917)
DNA (684bp) protein (228aa)
Biotin synthesis protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WT53_9GAMM
methylase involved in ubiquinone/menaquinone biosynthesis
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:AGG87837.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_944_curated_25
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31932..33158)
DNA (1227bp) protein (409aa)
Cytosine deaminase-like metal-dependent hydrolase n=1 Tax=Rhodanobacter denitrificans RepID=M4NJ54_9GAMM
cytosine deaminase-like metal-dependent hydrolase
Cytosine deaminase-like metal-dependent hydrolase {ECO:0000313|EMBL:AGG87836.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_944_curated_26
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33163..34047)
DNA (885bp) protein (295aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Rhodanobacter denitrificans RepID=M4NB46_9GAMM
methylase involved in ubiquinone/menaquinone biosynthesis
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:AGG87835.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_944_curated_27
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34206..35024)
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WT56_9GAMM
uncharacterized protein involved in exopolysaccharide biosynthesis
Uncharacterized protein involved in exopolysaccharide biosynthesis {ECO:0000313|EMBL:AGG87834.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_944_curated_28
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35035..36204)
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WT57_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87833.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_944_curated_29
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36201..37130)
DNA (930bp) protein (310aa)
Glycosyl transferase n=1 Tax=Rhodanobacter denitrificans RepID=M4ND95_9GAMM
glycosyl transferase
Glycosyl transferase {ECO:0000313|EMBL:AGG87832.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_944_curated_30
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37127..38380)
DNA (1254bp) protein (418aa)
Membrane protein involved in the export of O-antigen and teichoic acid n=1 Tax=Rhodanobacter denitrificans RepID=M4NJ50_9GAMM
membrane protein involved in the export of O-antigen and teichoic acid
Membrane protein involved in the export of O-antigen and teichoic acid {ECO:0000313|EMBL:AGG87831.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying items 1-30 of 41 in total

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