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scnpilot_solids1_trim150_scaffold_383_curated

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_383_curated_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..396
DNA (396bp) protein (132aa)
Monofunctional biosynthetic peptidoglycan transglycosylase {ECO:0000256|HAMAP-Rule:MF_00766, ECO:0000256|SAAS:SAAS00055690}; Short=Monofunctional TGase {ECO:0000256|HAMAP-Rule:MF_00766};; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00766, ECO:0000256|SAAS:SAAS00055699};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Monofunctional biosynthetic peptidoglycan transglycosylase n=1 Tax=Rhodanobacter denitrificans RepID=U3GKL7_9GAMM
monofunctional biosynthetic peptidoglycan transglycosylase
scnpilot_solids1_trim150_scaffold_383_curated_2
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

495..923
DNA (429bp) protein (143aa)
Signal transduction protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WG87_9GAMM
Signal transduction protein {ECO:0000313|EMBL:EIL98478.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative signal-transduction protein containing cAMP-binding and CBS domains
scnpilot_solids1_trim150_scaffold_383_curated_3
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(950..2215)
DNA (1266bp) protein (422aa)
ATP/ADP translocase n=1 Tax=Rhodanobacter denitrificans RepID=I4WSV2_9GAMM
ATP/ADP translocase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_383_curated_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2334..3932
DNA (1599bp) protein (533aa)
Choline dehydrogenase-like flavoprotein n=1 Tax=Rhodanobacter denitrificans RepID=M4NAZ7_9GAMM
choline dehydrogenase-like flavoprotein
Choline dehydrogenase-like flavoprotein {ECO:0000313|EMBL:AGG87770.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_383_curated_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3996..5879)
DNA (1884bp) protein (628aa)
Peptidase M48 Ste24p n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WG84_9GAMM
Peptidase M48 Ste24p {ECO:0000313|EMBL:EIL98475.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Zn-dependent protease with chaperone function
scnpilot_solids1_trim150_scaffold_383_curated_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5926..6513)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NE41_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87768.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_383_curated_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6571..7884
DNA (1314bp) protein (438aa)
Penicillin-binding protein, beta-lactamase class C n=1 Tax=Rhodanobacter denitrificans RepID=M4ND45_9GAMM
penicillin-binding protein, beta-lactamase class C
Penicillin-binding protein, beta-lactamase class C {ECO:0000313|EMBL:AGG87767.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_383_curated_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7955..8980)
DNA (1026bp) protein (342aa)
TonB family protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NIX9_9GAMM
TonB family protein
TonB family protein {ECO:0000313|EMBL:AGG87766.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_383_curated_9

Not on your lists

comp(9363..9899)
DNA (537bp) protein (179aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034A1E20
Methionine repressor MetJ {ECO:0000313|EMBL:EQD28365.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
transcriptional regulator
scnpilot_solids1_trim150_scaffold_383_curated_10
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10600..10995)
DNA (396bp) protein (132aa)
Glycine cleavage system H protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WG79_9GAMM
glycine cleavage system H protein
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
scnpilot_solids1_trim150_scaffold_383_curated_11
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11087..12187)
DNA (1101bp) protein (367aa)
aminomethyltransferase (EC:2.1.2.10)
Aminomethyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NE36_9GAMM
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_383_curated_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12275..14149)
DNA (1875bp) protein (625aa)
Sulfate adenylyltransferase subunit 1 {ECO:0000313|EMBL:AGG87762.1}; EC=2.7.1.25 {ECO:0000313|EMBL:AGG87762.1};; EC=2.7.7.4 {ECO:0000313|EMBL:AGG87762.1};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
adenylylsulfate kinase (EC:2.7.7.4 2.7.1.25)
Bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WSW1_9GAMM
scnpilot_solids1_trim150_scaffold_383_curated_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14149..15126)
DNA (978bp) protein (326aa)
sulfate adenylyltransferase subunit 2 (EC:2.7.7.4)
Sulfate adenylyltransferase subunit 2 {ECO:0000256|HAMAP-Rule:MF_00064}; EC=2.7.7.4 {ECO:0000256|HAMAP-Rule:MF_00064};; ATP-sulfurylase small subunit {ECO:0000256|HAMAP-Rule:MF_00064}; Sulfate adenylate transferase {ECO:0000256|HAMAP-Rule:MF_00064}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Sulfate adenylyltransferase subunit 2 n=1 Tax=Rhodanobacter denitrificans RepID=M4NIX3_9GAMM
scnpilot_solids1_trim150_scaffold_383_curated_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15322..16719)
DNA (1398bp) protein (466aa)
amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit (EC:6.3.5.-)
Amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit {ECO:0000313|EMBL:AGG87760.1}; EC=6.3.5.- {ECO:0000313|EMBL:AGG87760.1};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit n=1 Tax=Rhodanobacter denitrificans RepID=M4NAY8_9GAMM
scnpilot_solids1_trim150_scaffold_383_curated_15
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16888..18498
DNA (1611bp) protein (537aa)
Electron transfer flavoprotein-ubiquinone oxidoreductase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WG74_9GAMM
Electron transfer flavoprotein-ubiquinone oxidoreductase {ECO:0000313|EMBL:EIL98465.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
flavin-dependent dehydrogenase
scnpilot_solids1_trim150_scaffold_383_curated_16
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18467..20599
DNA (2133bp) protein (711aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WG71_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL98462.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_383_curated_17
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20771..21517
DNA (747bp) protein (249aa)
Electron transfer flavoprotein subunit beta n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1H7_9GAMM
Electron transfer flavoprotein subunit beta {ECO:0000313|EMBL:EIL93318.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
electron transfer flavoprotein, beta subunit
scnpilot_solids1_trim150_scaffold_383_curated_18
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21632..22576
DNA (945bp) protein (315aa)
Electron transfer flavoprotein, alpha subunit n=1 Tax=Rhodanobacter denitrificans RepID=M4NAY4_9GAMM
electron transfer flavoprotein, alpha subunit
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_383_curated_19
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22842..23411
DNA (570bp) protein (190aa)
Uncharacterized protein {ECO:0000313|EMBL:KFN43283.1}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae CC-JY-1.;"
Type 11 methyltransferase id=2463951 bin=GWF1_Xanthomonadales_69_6 species=Rhodanobacter thiooxydans genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
methylase
scnpilot_solids1_trim150_scaffold_383_curated_20
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23876..24997
DNA (1122bp) protein (374aa)
Group 1 glycosyl transferase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VTY8_9GAMM
Group 1 glycosyl transferase {ECO:0000313|EMBL:EIL90679.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_383_curated_21
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24990..25916
DNA (927bp) protein (309aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VTY7_9GAMM
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:EIL90678.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_383_curated_22
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26115..27068
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VTY6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL90677.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein; K07027
scnpilot_solids1_trim150_scaffold_383_curated_23
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27273..28235
DNA (963bp) protein (321aa)
Family 2 glycosyl transferase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VTY5_9GAMM
Family 2 glycosyl transferase {ECO:0000313|EMBL:EIL90676.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
family 2 glycosyl transferase
scnpilot_solids1_trim150_scaffold_383_curated_24
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28360..30252
DNA (1893bp) protein (631aa)
Uncharacterized protein n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IWU3_RHOCS
Uncharacterized protein {ECO:0000313|EMBL:KGQ20805.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_383_curated_25
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30479..30745
DNA (267bp) protein (89aa)
ISxcd1 transposase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WG58_9GAMM
ISxcd1 transposase {ECO:0000313|EMBL:EIL98449.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
tra5; transposase
scnpilot_solids1_trim150_scaffold_383_curated_26
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30766..31566
DNA (801bp) protein (267aa)
ISxac2 transposase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WG59_9GAMM
ISxac2 transposase {ECO:0000313|EMBL:EIL98450.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
ISxac2 transposase; K07497 putative transposase
scnpilot_solids1_trim150_scaffold_383_curated_27
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31714..32568)
DNA (855bp) protein (285aa)
Methyltransferase type 12 n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7TQ23_DESML
Methyltransferase type 12 {ECO:0000313|EMBL:KGQ20803.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_383_curated_28
unknown

Not on your lists

comp(32931..33350)
DNA (420bp) protein (140aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_383_curated_29
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33520..34317)
DNA (798bp) protein (266aa)
UDP-glucose 4-epimerase (EC:5.1.3.2); K01784 UDP-glucose 4-epimerase [EC:5.1.3.2]
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000316A300
NAD-dependent epimerase {ECO:0000313|EMBL:KDE90860.1}; TaxID=1451188 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia M30.;"
scnpilot_solids1_trim150_scaffold_383_curated_30
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34452..39722)
DNA (5271bp) protein (1757aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E28C3A
Uncharacterized protein {ECO:0000313|EMBL:KDE90859.1}; TaxID=1451188 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia M30.;"
wxocA; hypothetical protein
Displaying items 1-30 of 51 in total

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