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scnpilot_solids1_trim150_scaffold_3399_curated

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_3399_curated_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..228)
DNA (228bp) protein (76aa)
Copper-containing nitrite reductase {ECO:0000313|EMBL:ADE28551.1}; EC=1.7.2.1 {ECO:0000313|EMBL:ADE28551.1};; Dissimilatory nitrite reductase (NO-forming), copper type apoprotein {ECO:0000313|EMBL:AGG89997.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Copper-containing nitrite reductase n=2 Tax=Rhodanobacter RepID=D5JAK6_9GAMM
dissimilatory nitrite reductase (NO-forming), copper type apoprotein
scnpilot_solids1_trim150_scaffold_3399_curated_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(358..1608)
DNA (1251bp) protein (417aa)
Uncharacterized protein involved in response to NO n=1 Tax=Rhodanobacter denitrificans RepID=M4NAV1_9GAMM
uncharacterized protein involved in response to NO
Uncharacterized protein involved in response to NO {ECO:0000313|EMBL:AGG87710.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_3399_curated_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1707..2468)
DNA (762bp) protein (254aa)
cAMP-binding protein n=2 Tax=Rhodanobacter denitrificans RepID=M4NAY9_9GAMM
cAMP-binding protein
cAMP-binding protein {ECO:0000313|EMBL:AGG87709.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_3399_curated_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2504..3904)
DNA (1401bp) protein (467aa)
Coproporphyrinogen-III oxidase {ECO:0000256|PIRNR:PIRNR000167}; EC=1.3.99.22 {ECO:0000256|PIRNR:PIRNR000167};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Coproporphyrinogen-III oxidase n=1 Tax=Rhodanobacter denitrificans RepID=M4NDZ5_9GAMM
oxygen-independent coproporphyrinogen III oxidase
scnpilot_solids1_trim150_scaffold_3399_curated_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4008..4994)
DNA (987bp) protein (329aa)
Fumarylacetoacetate (FAA) hydrolase n=1 Tax=Rhodanobacter denitrificans RepID=I4WMF6_9GAMM
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase {ECO:0000313|EMBL:AGG87707.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_3399_curated_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5032..6330)
DNA (1299bp) protein (433aa)
homogentisate 1,2-dioxygenase (EC:1.13.11.5)
Homogentisate 1,2-dioxygenase {ECO:0000256|HAMAP-Rule:MF_00334, ECO:0000256|SAAS:SAAS00015626}; Short=HGDO {ECO:0000256|HAMAP-Rule:MF_00334};; EC=1.13.11.5 {ECO:0000256|HAMAP-Rule:MF_00334, ECO:0000256|SAAS:SAAS00015614};; Homogentisate oxygenase {ECO:0000256|HAMAP-Rule:MF_00334}; Homogentisic acid oxidase {ECO:0000256|HAMAP-Rule:MF_00334}; Homogentisicase {ECO:0000256|HAMAP-Rule:MF_00334}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.
Homogentisate 1,2-dioxygenase n=1 Tax=Rhodanobacter denitrificans RepID=I4WMF7_9GAMM
scnpilot_solids1_trim150_scaffold_3399_curated_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6342..6884)
DNA (543bp) protein (181aa)
4-hydroxyphenylpyruvate dioxygenase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE61_9GAMM
4-hydroxyphenylpyruvate dioxygenase {ECO:0000313|EMBL:EIL97752.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
4-hydroxyphenylpyruvate dioxygenase
Displaying 7 items

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