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scnpilot_solids1_trim150_scaffold_849_curated

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_849_curated_1
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..2244)
DNA (2244bp) protein (748aa)
Putative Beta-(1-3)-glucosyl transferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSA5_9GAMM
Putative Beta-(1-3)-glucosyl transferase {ECO:0000313|EMBL:EIM02347.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
exo-beta-1,3-glucanase
scnpilot_solids1_trim150_scaffold_849_curated_2
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2394..2861)
DNA (468bp) protein (156aa)
Ferritin Dps family protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSA6_9GAMM
Ferritin Dps family protein {ECO:0000313|EMBL:EIM02348.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
DNA-binding ferritin-like protein (oxidative damage protectant)
scnpilot_solids1_trim150_scaffold_849_curated_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2997..6986
DNA (3990bp) protein (1330aa)
ATP-dependent helicase HrpA n=1 Tax=Rhodanobacter denitrificans RepID=M4NJG2_9GAMM
ATP-dependent helicase HrpA
ATP-dependent RNA helicase {ECO:0000313|EMBL:EIL94441.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids1_trim150_scaffold_849_curated_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7009..7488)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSA8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM02350.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_849_curated_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7631..9763
DNA (2133bp) protein (711aa)
RelA/SpoT family (P)ppGpp synthetase n=1 Tax=Rhodanobacter denitrificans RepID=I4WM18_9GAMM
RelA/SpoT family (P)ppGpp synthetase {ECO:0000313|EMBL:EIM02351.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
(p)ppGpp synthetase, RelA/SpoT family
scnpilot_solids1_trim150_scaffold_849_curated_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9851..11539
DNA (1689bp) protein (563aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NH60_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90239.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_849_curated_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11547..12386
DNA (840bp) protein (280aa)
Nucleoside-diphosphate-sugar epimerase n=2 Tax=Rhodanobacter denitrificans RepID=M4NKM1_9GAMM
nucleoside-diphosphate-sugar epimerase
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:AGG90238.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_849_curated_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12571..14829
DNA (2259bp) protein (753aa)
Penicillin-binding protein 1B n=1 Tax=Rhodanobacter denitrificans RepID=I4WR29_9GAMM
Penicillin-binding protein 1B {ECO:0000256|PIRNR:PIRNR002799}; Short=PBP-1b {ECO:0000256|PIRNR:PIRNR002799};; Short=PBP1b {ECO:0000256|PIRNR:PIRNR002799};; Murein polymerase {ECO:0000256|PIRNR:PIRNR002799}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
penicillin-binding protein 1B
scnpilot_solids1_trim150_scaffold_849_curated_9
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14832..15356
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSB3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM02355.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_849_curated_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15395..15784)
DNA (390bp) protein (130aa)
Putative membrane protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NH09_9GAMM
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AGG90235.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_849_curated_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15858..16406)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WR26_9GAMM
Peroxiredoxin
Peroxiredoxin {ECO:0000313|EMBL:AGG90234.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_849_curated_12
Aureococcus anophagefferens, Aureococcus, Pelagomonadales, Pelagophyceae, Eukaryota

Not on your lists

17021..18286
DNA (1266bp) protein (422aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens RepID=F0XZ32_AURAN
Putative uncharacterized protein {ECO:0000313|EMBL:EGB11868.1}; Flags: Fragment;; TaxID=44056 species="Eukaryota; Stramenopiles; Pelagophyceae; Pelagomonadales; Aureococcus.;" source="Aureococcus anophagefferens (Harmful bloom alga).;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_849_curated_13
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18332..18700
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WR24_9GAMM
lactoylglutathione lyase family protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_849_curated_14
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18720..19658)
DNA (939bp) protein (313aa)
Cation diffusion facilitator family transporter n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSB6_9GAMM
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:EIM02358.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
cation diffusion facilitator family transporter
scnpilot_solids1_trim150_scaffold_849_curated_15
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19712..19981
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WR22_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90230.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_849_curated_16
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19990..20340)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NH51_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90229.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_849_curated_17
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20546..21115
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NKL3_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90228.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_849_curated_18
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21263..22024
DNA (762bp) protein (254aa)
Type 11 methyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSB8_9GAMM
Type 11 methyltransferase {ECO:0000313|EMBL:EIM02360.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
methylase involved in ubiquinone/menaquinone biosynthesis
scnpilot_solids1_trim150_scaffold_849_curated_19
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22039..22956)
DNA (918bp) protein (306aa)
Transcriptional regulator n=1 Tax=Rhodanobacter denitrificans RepID=M4NRQ2_9GAMM
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AGG90226.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_849_curated_20
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23080..23712
DNA (633bp) protein (211aa)
NADP oxidoreductase, coenzyme F420-dependent n=1 Tax=Rhodanobacter denitrificans RepID=I4WR19_9GAMM
putative dinucleotide-binding enzyme
Putative dinucleotide-binding enzyme {ECO:0000313|EMBL:AGG90225.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_849_curated_21
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23758..24147
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSC1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM02363.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_849_curated_22
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24211..25020
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSC2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM02364.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_849_curated_23
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25017..25721
DNA (705bp) protein (235aa)
Putative esterase n=1 Tax=Rhodanobacter denitrificans RepID=M4NJE1_9GAMM
putative esterase
Putative esterase {ECO:0000313|EMBL:AGG90222.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_849_curated_24
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25874..27223
DNA (1350bp) protein (450aa)
Inner membrane protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WR15_9GAMM
Inner membrane protein involved in colicin E2 resistance
Inner membrane protein involved in colicin E2 resistance {ECO:0000313|EMBL:AGG90221.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_849_curated_25
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27220..27912
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WR14_9GAMM
universal bacterial protein YeaZ
Universal bacterial protein YeaZ {ECO:0000313|EMBL:AGG90220.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_849_curated_26
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27940..28977)
DNA (1038bp) protein (346aa)
Putative membrane protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WR12_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_849_curated_27
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29078..29974
DNA (897bp) protein (299aa)
Transcriptional regulator n=1 Tax=Rhodanobacter denitrificans RepID=M4NJD7_9GAMM
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AGG90217.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_849_curated_28
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30014..30817)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NRP1_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90216.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_849_curated_29
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30989..32734)
DNA (1746bp) protein (582aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
phosphoenolpyruvate--protein phosphotransferase (EC:2.7.3.9)
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NGY9_9GAMM
scnpilot_solids1_trim150_scaffold_849_curated_30
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32879..33148)
DNA (270bp) protein (90aa)
Phosphotransferase system HPr (HPr) family protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NH38_9GAMM
phosphotransferase system HPr (HPr) family protein
Phosphotransferase system HPr (HPr) family protein {ECO:0000313|EMBL:AGG90214.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying items 1-30 of 56 in total

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