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scnpilot_solids1_trim150_scaffold_213_curated

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_213_curated_1
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

206..2920
DNA (2715bp) protein (905aa)
phosphoesterase n=1 Tax=Cytophagales str. B6 RepID=UPI0003B61CC0
Phosphoesterase {ECO:0000313|EMBL:EHQ30535.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
phosphoesterase
scnpilot_solids1_trim150_scaffold_213_curated_2
Joostella marina, Joostella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3134..3985
DNA (852bp) protein (284aa)
Aldo/keto reductase, diketogulonate reductase n=1 Tax=Joostella marina DSM 19592 RepID=I3CA93_9FLAO
Aldo/keto reductase, diketogulonate reductase {ECO:0000313|EMBL:EIJ40536.1}; TaxID=926559 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Joostella.;" source="Joostella marina DSM 19592.;"
methylglyoxal reductase
scnpilot_solids1_trim150_scaffold_213_curated_3
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

4011..4994
DNA (984bp) protein (328aa)
aldehyde oxidase n=1 Tax=Spirosoma luteum RepID=UPI0003707948
Aldehyde oxidase {ECO:0000313|EMBL:KFC18223.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
aldo/keto reductase
scnpilot_solids1_trim150_scaffold_213_curated_4
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(5097..6356)
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GML0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCH55138.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_213_curated_5
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(6381..9140)
DNA (2760bp) protein (920aa)
TonB-dependent receptor plug n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GML1_9BACT
TonB-dependent receptor plug {ECO:0000313|EMBL:CCH55139.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
TonB-dependent receptor
scnpilot_solids1_trim150_scaffold_213_curated_6
unknown

Not on your lists

9275..9661
DNA (387bp) protein (129aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_213_curated_7
Hymenobacter swuensis, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(9597..11360)
DNA (1764bp) protein (588aa)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI0003652252
Uncharacterized protein {ECO:0000313|EMBL:AHJ97979.1}; TaxID=1227739 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter swuensis DY53.;"
sulfatase
scnpilot_solids1_trim150_scaffold_213_curated_8
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11551..13026
DNA (1476bp) protein (492aa)
phospholipase D/transphosphatidylase; K06131 cardiolipin synthase [EC:2.7.8.-]
Cardiolipin synthase {ECO:0000256|HAMAP-Rule:MF_01916}; Short=CL synthase {ECO:0000256|HAMAP-Rule:MF_01916};; EC=2.7.8.- {ECO:0000256|HAMAP-Rule:MF_01916};; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
Cardiolipin synthase n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XT94_PEDHD
scnpilot_solids1_trim150_scaffold_213_curated_9
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

13260..14909
DNA (1650bp) protein (550aa)
Uncharacterized protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EI44_RUNSL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI50789.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
scnpilot_solids1_trim150_scaffold_213_curated_10
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15166..19320)
DNA (4155bp) protein (1385aa)
Chondroitinase-AC {ECO:0000313|EMBL:KHJ36865.1}; EC=4.2.2.5 {ECO:0000313|EMBL:KHJ36865.1};; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00036D8942
heparinase II/III family protein
scnpilot_solids1_trim150_scaffold_213_curated_11
Cyclobacteriaceae bacterium AK24, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(19403..21274)
DNA (1872bp) protein (624aa)
Uncharacterized protein n=1 Tax=Cyclobacteriaceae bacterium AK24 RepID=R7ZZ34_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EON79362.1}; TaxID=1288963 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; unclassified Cyclobacteriaceae.;" source="Cyclobacteriaceae bacterium AK24.;"
heparinase II/III family protein
scnpilot_solids1_trim150_scaffold_213_curated_12
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

21451..21801
DNA (351bp) protein (117aa)
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) id=4913349 bin=GWA2_Ignavibacteria_55_11 species=Kordia algicida genus=Kordia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
pectin degradation protein
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
scnpilot_solids1_trim150_scaffold_213_curated_13
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21863..23062)
DNA (1200bp) protein (400aa)
Glycosyl hydrolase family 88 n=1 Tax=Niabella soli DSM 19437 RepID=H1NS30_9SPHI
Glucuronyl hydrolase {ECO:0000313|EMBL:AHF15523.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
glycosyl hydrolase family protein
scnpilot_solids1_trim150_scaffold_213_curated_14
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23097..24272)
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TG05_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW01608.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_213_curated_15
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24463..25995)
DNA (1533bp) protein (511aa)
Putative uncharacterized protein id=4324557 bin=GWA2_Bacteroidetes_42_15 species=Cyclobacterium marinum genus=Cyclobacterium taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
hypothetical protein
Tax=GWE2_Bacteroidetes_42_39_curated
scnpilot_solids1_trim150_scaffold_213_curated_16
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26054..28291)
DNA (2238bp) protein (746aa)
Uncharacterized protein id=4145067 bin=GWF2_Bacteroidetes_42_66 species=Parabacteroides goldsteinii genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
polysaccharide lyase 8
Tax=GWE2_Bacteroidetes_42_39_curated
scnpilot_solids1_trim150_scaffold_213_curated_17
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28329..30200)
DNA (1872bp) protein (624aa)
Heparinase II/III-like protein n=1 Tax=Clostridium pasteurianum BC1 RepID=R4JYI6_CLOPA
Heparinase II/III-like protein
Heparinase II/III-like protein {ECO:0000313|EMBL:AGK95892.1}; Flags: Precursor;; TaxID=86416 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum BC1.;"
scnpilot_solids1_trim150_scaffold_213_curated_18
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30608..31582)
DNA (975bp) protein (325aa)
Putative uncharacterized protein id=4483424 bin=GWC2_Bacteroidetes_46_850 species=Niastella koreensis genus=Niastella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
scnpilot_solids1_trim150_scaffold_213_curated_19
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31661..33427)
DNA (1767bp) protein (589aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037DEC1B
RagB/SusD domain-containing protein
Tax=GWC2_Bacteroidetes_46_850_curated
scnpilot_solids1_trim150_scaffold_213_curated_20
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33447..36482)
DNA (3036bp) protein (1012aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036528CB
TonB-dependent receptor plug
Tax=GWC2_Bacteroidetes_46_850_curated
scnpilot_solids1_trim150_scaffold_213_curated_21
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36514..38307)
DNA (1794bp) protein (598aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000382A6AA
RagB/SusD domain-containing protein
Tax=GWC2_Bacteroidetes_46_850_curated
scnpilot_solids1_trim150_scaffold_213_curated_22
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38320..41538)
DNA (3219bp) protein (1073aa)
Putative uncharacterized protein id=4483412 bin=GWC2_Bacteroidetes_46_850 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
TonB-dependent receptor plug
Tax=GWC2_Bacteroidetes_46_850_curated
scnpilot_solids1_trim150_scaffold_213_curated_23
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(42379..43635)
DNA (1257bp) protein (419aa)
Sulfatase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y5I4_9SPHI
Sulfatase {ECO:0000313|EMBL:KFC60254.1}; TaxID=1492737 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
sulfatase
scnpilot_solids1_trim150_scaffold_213_curated_24
Elizabethkingia anophelis, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

43963..44157
DNA (195bp) protein (65aa)
Uncharacterized protein n=3 Tax=Elizabethkingia RepID=L8K3N5_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:CDN75636.1}; TaxID=1117645 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia anophelis.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_213_curated_25
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

44655..45683
DNA (1029bp) protein (343aa)
Transcriptional regulator, LacI family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TEW2_NIAKG
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator
Transcriptional regulator, LacI family {ECO:0000313|EMBL:AEW01550.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_213_curated_26
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(45868..47787)
DNA (1920bp) protein (640aa)
molecular chaperone DnaK n=1 Tax=Segetibacter koreensis RepID=UPI000364C4CA
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
chaperone protein dnaK; K04043 molecular chaperone DnaK
scnpilot_solids1_trim150_scaffold_213_curated_27
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(47908..48495)
DNA (588bp) protein (196aa)
dephospho-CoA kinase; K00859 dephospho-CoA kinase [EC:2.7.1.24]
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Dephospho-CoA kinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGG0_NIAKG
scnpilot_solids1_trim150_scaffold_213_curated_28
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(48600..48947)
DNA (348bp) protein (116aa)
Preprotein translocase, YajC subunit n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGG1_NIAKG
preprotein translocase subunit YajC; K03210 preprotein translocase subunit YajC
Preprotein translocase, YajC subunit {ECO:0000313|EMBL:AEV97384.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_213_curated_29
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(48985..49419)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SAL5_PEDSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY52635.1}; Flags: Precursor;; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
scnpilot_solids1_trim150_scaffold_213_curated_30
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(49443..50342)
DNA (900bp) protein (300aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000361EE17
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
NusB antitermination factor; K03625 N utilization substance protein B
Displaying items 1-30 of 38 in total

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