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scnpilot_solids1_trim150_scaffold_318_curated

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_318_curated_1
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(298..906)
DNA (609bp) protein (203aa)
Copper chaperone n=1 Tax=Joostella marina DSM 19592 RepID=I3CB71_9FLAO
Mercuric transport protein periplasmic component {ECO:0000313|EMBL:KHJ36480.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
heavy metal transport/detoxification protein
scnpilot_solids1_trim150_scaffold_318_curated_2
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(903..1280)
DNA (378bp) protein (126aa)
Transcriptional regulator, ArsR family n=2 Tax=Bacteroidetes RepID=C2G243_9SPHI
putative transcriptional regulator
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids1_trim150_scaffold_318_curated_3
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

1430..1807
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0G5R3_ECHVK
Uncharacterized protein {ECO:0000313|EMBL:KGO08685.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (Chryseobacterium miricola).;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_318_curated_4
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

1862..2146
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0G668_ECHVK
Glutaredoxin {ECO:0000313|EMBL:KGO08684.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (Chryseobacterium miricola).;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_318_curated_5
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

2238..4634
DNA (2397bp) protein (799aa)
Copper/silver-translocating P-type ATPase n=1 Tax=Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134) RepID=I3Z802_BELBD
Copper-transporting ATPase {ECO:0000313|EMBL:KGO08683.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (Chryseobacterium miricola).;"
copper/silver-translocating P-type ATPase
scnpilot_solids1_trim150_scaffold_318_curated_6
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

4618..5091
DNA (474bp) protein (158aa)
Copper chaperone n=1 Tax=Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134) RepID=I3Z803_BELBD
Uncharacterized protein {ECO:0000313|EMBL:KGO08681.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (Chryseobacterium miricola).;"
copper chaperone
scnpilot_solids1_trim150_scaffold_318_curated_7
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

5088..5774
DNA (687bp) protein (229aa)
Thiol:disulfide interchange protein n=1 Tax=Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134) RepID=I3Z804_BELBD
Thiol:disulfide interchange protein {ECO:0000313|EMBL:KGO08680.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (Chryseobacterium miricola).;"
thiol:disulfide interchange protein
scnpilot_solids1_trim150_scaffold_318_curated_8
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5856..8027)
DNA (2172bp) protein (724aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036107C0
Uncharacterized protein {ECO:0000313|EMBL:KIA85071.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein
scnpilot_solids1_trim150_scaffold_318_curated_9
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8267..9154)
DNA (888bp) protein (296aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003712CC5
Cobalt-zinc-cadmium resistance protein {ECO:0000313|EMBL:EOR96716.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
cation diffusion facilitator family transporter
scnpilot_solids1_trim150_scaffold_318_curated_10
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9241..10515)
DNA (1275bp) protein (425aa)
heavy metal translocating P-type ATPase (EC:3.6.3.4); K01533 Cu2+-exporting ATPase [EC:3.6.3.4]
Heavy metal translocating P-type ATPase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YCI1_9SPHI
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:EHQ30659.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
scnpilot_solids1_trim150_scaffold_318_curated_11

Not on your lists

comp(11005..11202)
DNA (198bp) protein (66aa)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI0003745B60
arabinose efflux permease family protein
Uncharacterized protein {ECO:0000313|EMBL:KKN29123.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
scnpilot_solids1_trim150_scaffold_318_curated_12
Vitellibacter vladivostokensis, Vitellibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11199..13292)
DNA (2094bp) protein (698aa)
copper-transporting ATPase, P-type (copB); K01533 Cu2+-exporting ATPase [EC:3.6.3.4]
Copper-transporting ATPase, P-type (CopB) n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BJN2_ZUNPS
ATPase {ECO:0000313|EMBL:KJJ39599.1}; TaxID=171194 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Vitellibacter.;" source="Vitellibacter vladivostokensis.;"
scnpilot_solids1_trim150_scaffold_318_curated_13

Not on your lists

comp(13429..15801)
DNA (2373bp) protein (791aa)
putative phosphoketolase (EC:4.1.2.22); K01632 fructose-6-phosphate phosphoketolase [EC:4.1.2.22]
Probable phosphoketolase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFN9_NITHX
Uncharacterized protein {ECO:0000313|EMBL:KKN85278.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
scnpilot_solids1_trim150_scaffold_318_curated_14

Not on your lists

comp(15814..17013)
DNA (1200bp) protein (400aa)
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI00037B5872
Uncharacterized protein {ECO:0000313|EMBL:KKN85277.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
acetate kinase
scnpilot_solids1_trim150_scaffold_318_curated_15
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(17099..19639)
DNA (2541bp) protein (847aa)
alpha-glucan phosphorylase; K00688 starch phosphorylase [EC:2.4.1.1]
Alpha-glucan phosphorylase n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0J1N6_CYCMS
Alpha-glucan phosphorylase {ECO:0000313|EMBL:AEL28245.1}; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium marinum (strain ATCC 25205 / DSM 745) (Flectobacillus; marinus).;"
scnpilot_solids1_trim150_scaffold_318_curated_16
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19690..20355)
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FXC0_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EEI92361.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_318_curated_17
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20356..20895)
DNA (540bp) protein (180aa)
Putative uncharacterized protein n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FVZ4_9FLAO
Putative uncharacterized protein {ECO:0000313|EMBL:EIA07315.1}; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_318_curated_18

Not on your lists

comp(20950..22635)
DNA (1686bp) protein (562aa)
Alpha amylase catalytic region n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0J1N9_CYCMS
Uncharacterized protein {ECO:0000313|EMBL:KKN85273.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
alpha amylase
scnpilot_solids1_trim150_scaffold_318_curated_19
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22686..22901)
DNA (216bp) protein (72aa)
hypothetical protein n=1 Tax=Cytophaga aurantiaca RepID=UPI00037619CD
Uncharacterized protein {ECO:0000313|EMBL:EOR94110.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_318_curated_20
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22954..23985)
DNA (1032bp) protein (344aa)
Glyceraldehyde-3-phosphate dehydrogenase, type II {ECO:0000313|EMBL:EEI92359.1}; EC=1.2.1.59 {ECO:0000313|EMBL:EEI92359.1};; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
glyceraldehyde-3-phosphate dehydrogenase, type ii (EC:1.2.1.59); K00150 glyceraldehyde-3-phosphate dehydrogenase (NAD(P)) [EC:1.2.1.59]
Glyceraldehyde-3-phosphate dehydrogenase, type II n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FXB8_9SPHI
scnpilot_solids1_trim150_scaffold_318_curated_21

Not on your lists

comp(24206..24682)
DNA (477bp) protein (159aa)
Universal stress protein family n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FVT7_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KKM23090.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
universal stress protein UspA-like protein
scnpilot_solids1_trim150_scaffold_318_curated_22
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(24758..25480)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0J1P6_CYCMS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEL28255.1}; Flags: Precursor;; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium marinum (strain ATCC 25205 / DSM 745) (Flectobacillus; marinus).;"
scnpilot_solids1_trim150_scaffold_318_curated_23
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25488..25769)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Leeuwenhoekiella blandensis (strain CECT 7118 / CCUG 51940 / MED217) RepID=A3XKD3_LEEBM
Uncharacterized protein {ECO:0000313|EMBL:KJS04389.1}; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_318_curated_24
Marivirga tractuosa, Marivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(26056..26271)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) RepID=E4TUF2_MARTH
hypothetical protein; K08982 putative membrane protein
Uncharacterized protein {ECO:0000313|EMBL:ADR22070.1}; Flags: Precursor;; TaxID=643867 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Marivirga.;" source="Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB; 1408 / VKM B-1430 / H-43) (Microscilla tractuosa) (Flexibacter; tractuosus).;"
scnpilot_solids1_trim150_scaffold_318_curated_25
unknown

Not on your lists

comp(26356..26760)
DNA (405bp) protein (135aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_318_curated_26
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26783..27007)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) RepID=E4TUF2_MARTH
Membrane protein {ECO:0000313|EMBL:KIA85219.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
hypothetical protein; K08982 putative membrane protein
scnpilot_solids1_trim150_scaffold_318_curated_27
unknown

Not on your lists

comp(27233..27625)
DNA (393bp) protein (131aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_318_curated_28
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28085..29431)
DNA (1347bp) protein (449aa)
multidrug transporter n=1 Tax=Acaryochloris sp. CCMEE 5410 RepID=UPI0002483EEB
Uncharacterized protein {ECO:0000313|EMBL:KJS01543.1}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbaceae bacterium BRH_c16a.;"
arabinose efflux permease family protein
scnpilot_solids1_trim150_scaffold_318_curated_29
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29588..30166)
DNA (579bp) protein (193aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
Prolipoprotein diacylglyceryl transferase n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C5I1_SPHS2
prolipoprotein diacylglyceryl transferase
scnpilot_solids1_trim150_scaffold_318_curated_30
Desulfomonile tiedjei, Desulfomonile, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30707..32038)
DNA (1332bp) protein (444aa)
protoporphyrinogen oxidase (EC:5.4.99.9)
Protoporphyrinogen oxidase {ECO:0000313|EMBL:AFM23630.1}; EC=5.4.99.9 {ECO:0000313|EMBL:AFM23630.1};; Flags: Precursor;; TaxID=706587 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfomonile.;" source="Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1).;"
hypothetical protein n=1 Tax=Nodosilinea nodulosa RepID=UPI0002E3A16C
Displaying items 1-30 of 46 in total

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