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scnpilot_solids1_trim150_scaffold_140_curated

Search features with annotation key words

Displaying items 1-30 of 143 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_140_curated_1
Formosa sp. AK20, Formosa, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

241..1074
DNA (834bp) protein (278aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI0003737192
Uncharacterized protein {ECO:0000313|EMBL:EMQ93756.1}; TaxID=1137281 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Formosa.;" source="Formosa sp. AK20.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_140_curated_2
Muricauda lutaonensis, Muricauda, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

1399..2061
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0IXM7_CYCMS
Uncharacterized protein {ECO:0000313|EMBL:AKA36101.1}; TaxID=516051 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Muricauda.;" source="Muricauda lutaonensis.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_140_curated_3
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2074..2274)
DNA (201bp) protein (67aa)
Putative uncharacterized protein id=4133424 bin=GWF2_Bacteroidetes_41_9 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_9 organism_group=Bacteroidetes
hypothetical protein
Tax=GWA2_Bacteroidetes_40_15_curated
scnpilot_solids1_trim150_scaffold_140_curated_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2462..3118
DNA (657bp) protein (219aa)
protein-L-isoaspartate O-methyltransferase; K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
Protein-L-isoaspartate O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00090}; EC=2.1.1.77 {ECO:0000256|HAMAP-Rule:MF_00090};; L-isoaspartyl protein carboxyl methyltransferase {ECO:0000256|HAMAP-Rule:MF_00090}; Protein L-isoaspartyl methyltransferase {ECO:0000256|HAMAP-Rule:MF_00090}; Protein-beta-aspartate methyltransferase {ECO:0000256|HAMAP-Rule:MF_00090}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain
Protein-L-isoaspartate O-methyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQY2_NIAKG
scnpilot_solids1_trim150_scaffold_140_curated_5
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3174..3407)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VPQ9_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL46801.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
scnpilot_solids1_trim150_scaffold_140_curated_6
Cyclobacteriaceae bacterium AK24, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

3631..3825
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Cyclobacteriaceae bacterium AK24 RepID=R7ZP81_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EON75868.1}; TaxID=1288963 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; unclassified Cyclobacteriaceae.;" source="Cyclobacteriaceae bacterium AK24.;"
scnpilot_solids1_trim150_scaffold_140_curated_7
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4166..5461)
DNA (1296bp) protein (432aa)
1,4-alpha-glucan branching enzyme (EC:2.4.1.18)
Alpha amylase catalytic region n=1 Tax=Niabella soli DSM 19437 RepID=H1NNQ0_9SPHI
Putative glycosidase {ECO:0000313|EMBL:GAO45705.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
scnpilot_solids1_trim150_scaffold_140_curated_8
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5557..6801
DNA (1245bp) protein (415aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase; K03527 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [EC:1.17.1.2]
Hydroxymethylbutenyl pyrophosphate reductase {ECO:0000313|EMBL:ACU64025.1}; EC=1.17.1.2 {ECO:0000313|EMBL:ACU64025.1};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Hydroxymethylbutenyl pyrophosphate reductase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PMC0_CHIPD
scnpilot_solids1_trim150_scaffold_140_curated_9
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

7061..7630
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037C4251
Uncharacterized protein {ECO:0000313|EMBL:CCH56295.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_140_curated_10
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7664..9826
DNA (2163bp) protein (721aa)
Sodium/hydrogen exchanger n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XSC9_PEDHD
sodium/hydrogen exchanger
Sodium/hydrogen exchanger {ECO:0000313|EMBL:ACU03474.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_solids1_trim150_scaffold_140_curated_11
unknown

Not on your lists

10163..10264
DNA (102bp) protein (34aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_140_curated_12
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

10407..10958
DNA (552bp) protein (184aa)
Ferritin {ECO:0000256|RuleBase:RU361145}; EC=1.16.3.2 {ECO:0000256|RuleBase:RU361145};; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
Ferritin 1 n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FQT0_9FLAO
ferritin-like protein
scnpilot_solids1_trim150_scaffold_140_curated_13
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11088..12179)
DNA (1092bp) protein (364aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036DB0BE
Uncharacterized protein {ECO:0000313|EMBL:KIC93319.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_140_curated_14
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12480..13652)
DNA (1173bp) protein (391aa)
Uncharacterized protein id=4070473 bin=GWA2_Bacteroidetes_42_15 species=unknown genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
purple acid phosphatase
Tax=GWE2_Bacteroidetes_42_39_curated
scnpilot_solids1_trim150_scaffold_140_curated_15
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(13848..15629)
DNA (1782bp) protein (594aa)
Putative outer membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC13_GEMAT
putative outer membrane protein
Putative outer membrane protein {ECO:0000313|EMBL:BAH40040.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
scnpilot_solids1_trim150_scaffold_140_curated_16
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(15641..19186)
DNA (3546bp) protein (1182aa)
Putative outer membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC12_GEMAT
putative outer membrane protein
Putative outer membrane protein {ECO:0000313|EMBL:BAH40039.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
scnpilot_solids1_trim150_scaffold_140_curated_17
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(19390..20394)
DNA (1005bp) protein (335aa)
Anti-FecI sigma factor, FecR n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7E9_PALPW
Anti-FecI sigma factor FecR {ECO:0000313|EMBL:AHM63013.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
anti-feci sigma factor, fecr
scnpilot_solids1_trim150_scaffold_140_curated_18
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(20707..21294)
DNA (588bp) protein (196aa)
RNA polymerase sigma-70 factor, Bacteroides expansion family 1 n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KXK1_SOLCM
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:AHM63012.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
RNA polymerase sigma-70 factor, Bacteroides expansion family 1
scnpilot_solids1_trim150_scaffold_140_curated_19
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

21554..21880
DNA (327bp) protein (109aa)
ferredoxin n=1 Tax=Segetibacter koreensis RepID=UPI000369D8E8
Ferredoxin {ECO:0000313|EMBL:KGO08470.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (Chryseobacterium miricola).;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_140_curated_20
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

22650..23705
DNA (1056bp) protein (352aa)
deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; K01623 fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
Deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJP0_NIAKG
Deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000313|EMBL:AEW00787.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_140_curated_21
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23868..24779
DNA (912bp) protein (304aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; K01963 acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2]
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395}; Short=ACCase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_01395};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE79_NIAKG
scnpilot_solids1_trim150_scaffold_140_curated_22
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24867..25304
DNA (438bp) protein (146aa)
SsrA-binding protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PAC1_CHIPD
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
SsrA-binding protein; K03664 SsrA-binding protein
scnpilot_solids1_trim150_scaffold_140_curated_23
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25338..27752)
DNA (2415bp) protein (805aa)
Phosphoenolpyruvate synthase {ECO:0000256|PIRNR:PIRNR000854}; Short=PEP synthase {ECO:0000256|PIRNR:PIRNR000854};; EC=2.7.9.2 {ECO:0000256|PIRNR:PIRNR000854};; Pyruvate, water dikinase {ECO:0000256|PIRNR:PIRNR000854}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
phosphoenolpyruvate synthase; K01007 pyruvate, water dikinase [EC:2.7.9.2]
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036C3919
scnpilot_solids1_trim150_scaffold_140_curated_24
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

27924..28808
DNA (885bp) protein (295aa)
Transcriptional regulator, AraC family n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SC86_PEDSD
HTH-type transcriptional activator RhaS {ECO:0000313|EMBL:KHJ39027.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
AraC family transcriptional regulator
scnpilot_solids1_trim150_scaffold_140_curated_25
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28917..29135
DNA (219bp) protein (73aa)
Uncharacterized protein n=2 Tax=Leptospira santarosai serovar Shermani RepID=K8Y2H4_9LEPT
hypothetical protein
Tax=GWF2_Bacteroidetes_35_48_curated
scnpilot_solids1_trim150_scaffold_140_curated_26
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

29107..29451
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S4G0_PEDSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY50917.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
scnpilot_solids1_trim150_scaffold_140_curated_27
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29504..30931)
DNA (1428bp) protein (476aa)
L-serine dehydratase 1; K01752 L-serine dehydratase [EC:4.3.1.17]
L-serine dehydratase 1 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGH6_NIAKG
L-serine dehydratase 1 {ECO:0000313|EMBL:AEV97399.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_140_curated_28
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30963..31526)
DNA (564bp) protein (188aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGH4_NIAKG
FKBP-type peptidylprolyl isomerase
scnpilot_solids1_trim150_scaffold_140_curated_29
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(31510..31833)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGH3_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:GAO44338.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_140_curated_30
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

31943..32866
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000370B5E3
Uncharacterized protein {ECO:0000313|EMBL:KIC90161.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
Displaying items 1-30 of 143 in total

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