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scnpilot_solids1_trim150_scaffold_96_curated

Search features with annotation key words

Displaying items 1-30 of 82 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_96_curated_1
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3476..3811)
DNA (336bp) protein (112aa)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
CRISPR-associated protein Cas2 n=1 Tax=Niabella aurantiaca RepID=UPI000360079A
CRISPR-associated protein Cas2; K09951 CRISPR-associated protein Cas2
scnpilot_solids1_trim150_scaffold_96_curated_2
GWA2_Bacteroidetes_30_7_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3901..4683)
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Bergeyella zoohelcum ATCC 43767 RepID=K1LG92_9FLAO
hypothetical protein
Tax=GWA2_Bacteroidetes_30_7_curated
scnpilot_solids1_trim150_scaffold_96_curated_3
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4715..5608)
DNA (894bp) protein (298aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
CRISPR-associated endonuclease Cas1 n=1 Tax=Niabella soli DSM 19437 RepID=H1NJM4_9SPHI
Putative DNA repair protein; K15342 CRISP-associated protein Cas1
scnpilot_solids1_trim150_scaffold_96_curated_4
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5605..6036)
DNA (432bp) protein (144aa)
PilT protein-like protein n=1 Tax=Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) RepID=Q30PT6_SULDN
twitching motility protein PilT
Tax=GWA2_Bacteroidetes_31_9_curated
scnpilot_solids1_trim150_scaffold_96_curated_5
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6017..10411)
DNA (4395bp) protein (1465aa)
CRISPR-associated endonuclease Cas9 {ECO:0000256|HAMAP-Rule:MF_01480}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01480};; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
CRISPR-associated protein, Csn1 family n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VKD0_9SPHI
CRISPR-associated protein, Csn1 family; K09952 hypothetical protein
scnpilot_solids1_trim150_scaffold_96_curated_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10770..12875)
DNA (2106bp) protein (702aa)
Endonuclease MutS2 {ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|SAAS:SAAS00084246};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
DNA mismatch repair protein MutS domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGJ0_NIAKG
DNA mismatch repair protein MutS domain-containing protein; K07456 DNA mismatch repair protein MutS2
scnpilot_solids1_trim150_scaffold_96_curated_7
Paenibacillus durus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13216..13794
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036A2D04
Uncharacterized protein {ECO:0000313|EMBL:AKG34773.1}; TaxID=1333534 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus durus ATCC 35681.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_96_curated_8
Paenibacillus macerans, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14062..14637
DNA (576bp) protein (192aa)
Putative uncharacterized protein n=1 Tax=Paenibacillus lactis 154 RepID=G4HIF0_9BACL
Uncharacterized protein {ECO:0000313|EMBL:KFN05620.1}; TaxID=44252 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus macerans (Bacillus macerans).;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_96_curated_9
Bizionia argentinensis, Bizionia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14900..16552)
DNA (1653bp) protein (551aa)
Peptidase M1 family protein id=4974974 bin=GWA2_Flavobacterium_35_26 species=Flavobacterium frigoris genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Flavobacterium_35_26 organism_group=Bacteroidetes organism_desc=Good+ six scaffolds
Peptidase M1 family protein {ECO:0000313|EMBL:EGV44008.1}; TaxID=1046627 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Bizionia.;" source="Bizionia argentinensis JUB59.;"
peptidase M1, membrane alanine aminopeptidase
scnpilot_solids1_trim150_scaffold_96_curated_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16582..18243
DNA (1662bp) protein (554aa)
ABC transporter substrate-binding protein n=1 Tax=Niabella aurantiaca RepID=UPI00037BC2CA
ABC transporter periplasmic protein
ABC-type transporter, periplasmic subunit {ECO:0000313|EMBL:AEV97409.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_96_curated_11
unknown

Not on your lists

comp(18263..18949)
DNA (687bp) protein (229aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_96_curated_12
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18946..19608)
DNA (663bp) protein (221aa)
Peptide methionine sulfoxide reductase msrA; K07304 peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGI7_NIAKG
scnpilot_solids1_trim150_scaffold_96_curated_13
Tannerella sp. CAG:118, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19725..21533)
DNA (1809bp) protein (603aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI0003756DBF
Uncharacterized protein {ECO:0000313|EMBL:CCY35295.1}; TaxID=1262978 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella; environmental samples.;" source="Tannerella sp. CAG:118.;"
beta-galactosidase/beta-glucuronidase
scnpilot_solids1_trim150_scaffold_96_curated_14
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21676..23181
DNA (1506bp) protein (502aa)
Polysaccharide biosynthesis protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGI4_NIAKG
polysaccharide biosynthesis protein
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:AEV97407.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_96_curated_15
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23198..23803)
DNA (606bp) protein (202aa)
Thiopurine S-methyltransferase family protein n=1 Tax=Flavobacterium branchiophilum (strain FL-15) RepID=G2Z7C5_FLABF
Thiopurine S-methyltransferase {ECO:0000313|EMBL:KIA85675.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
thiopurine S-methyltransferase
scnpilot_solids1_trim150_scaffold_96_curated_16
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(23855..25651)
DNA (1797bp) protein (599aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
arginyl-tRNA synthetase; K01887 arginyl-tRNA synthetase [EC:6.1.1.19]
Arginine--tRNA ligase n=1 Tax=Niabella soli DSM 19437 RepID=H1NJI0_9SPHI
scnpilot_solids1_trim150_scaffold_96_curated_17
Vitellibacter vladivostokensis, Vitellibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25753..26220)
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Spirosoma luteum RepID=UPI00037ABDE0
RES superfamily protein {ECO:0000313|EMBL:KJJ39833.1}; TaxID=171194 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Vitellibacter.;" source="Vitellibacter vladivostokensis.;"
RES domain-containing protein
scnpilot_solids1_trim150_scaffold_96_curated_18
Lacinutrix sp. 5H-3-7-4, Lacinutrix, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26233..26742)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Lacinutrix sp. (strain 5H-3-7-4) RepID=F6GJ73_LACS5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH00125.1}; TaxID=983544 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Lacinutrix.;" source="Lacinutrix sp. (strain 5H-3-7-4).;"
scnpilot_solids1_trim150_scaffold_96_curated_19
unknown

Not on your lists

comp(26723..26857)
DNA (135bp) protein (45aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_96_curated_20
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

26924..28549
DNA (1626bp) protein (542aa)
ABC transporter related protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE84_NIAKG
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KIC90021.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
ABC transporter
scnpilot_solids1_trim150_scaffold_96_curated_21
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

28706..29173
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SB68_PEDSD
Uncharacterized protein {ECO:0000313|EMBL:KIC89933.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_96_curated_22
unknown

Not on your lists

29251..29382
DNA (132bp) protein (44aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_96_curated_23
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

29488..30405
DNA (918bp) protein (306aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WVQ8_9PORP
Molecular chaperone DnaJ {ECO:0000313|EMBL:AKD57765.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
chaperone DnaJ domain-containing protein; K05516 curved DNA-binding protein
scnpilot_solids1_trim150_scaffold_96_curated_24
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30415..30717
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003664DFE
hypothetical protein
Tax=GWF2_Bacteroidetes_35_48_curated
scnpilot_solids1_trim150_scaffold_96_curated_25
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

31014..32933
DNA (1920bp) protein (640aa)
glucosamine-6-phosphate deaminase; K02564 glucosamine-6-phosphate deaminase [EC:3.5.99.6]
Glucosamine-6-phosphate deaminase {ECO:0000313|EMBL:AEW00243.1}; EC=3.5.99.6 {ECO:0000313|EMBL:AEW00243.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Glucosamine-6-phosphate deaminase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9Q0_NIAKG
scnpilot_solids1_trim150_scaffold_96_curated_26
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(33021..34250)
DNA (1230bp) protein (410aa)
Major facilitator superfamily MFS_1 n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XUG6_PEDHD
major facilitator superfamily protein; K08223 MFS transporter, FSR family, fosmidomycin resistance protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACU03816.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_solids1_trim150_scaffold_96_curated_27
Kyrpidia tusciae, Kyrpidia, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

34444..35481
DNA (1038bp) protein (346aa)
Alcohol dehydrogenase GroES domain protein n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WVW7_KYRT2
alcohol dehydrogenase GroES domain-containing protein
Alcohol dehydrogenase GroES domain protein {ECO:0000313|EMBL:ADG05599.1}; TaxID=562970 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Kyrpidia.;" source="Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) (Bacillus; tusciae).;"
scnpilot_solids1_trim150_scaffold_96_curated_28
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

35591..36706
DNA (1116bp) protein (372aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YBB9_9SPHI
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ31173.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
sll1830; hypothetical protein
scnpilot_solids1_trim150_scaffold_96_curated_29
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

36722..37534
DNA (813bp) protein (271aa)
UspA domain-containing protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TF23_NIAKG
UspA domain-containing protein
UspA domain-containing protein {ECO:0000313|EMBL:AEW02643.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_96_curated_30
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

37540..39942
DNA (2403bp) protein (801aa)
Phosphoenolpyruvate synthase {ECO:0000256|PIRNR:PIRNR000854}; Short=PEP synthase {ECO:0000256|PIRNR:PIRNR000854};; EC=2.7.9.2 {ECO:0000256|PIRNR:PIRNR000854};; Pyruvate, water dikinase {ECO:0000256|PIRNR:PIRNR000854}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
phosphoenolpyruvate synthase; K01007 pyruvate, water dikinase [EC:2.7.9.2]
Phosphoenolpyruvate synthase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBV9_NIAKG
Displaying items 1-30 of 82 in total

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