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scnpilot_solids1_trim150_scaffold_58_curated

Search features with annotation key words

Displaying items 1-30 of 126 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_58_curated_1
unknown

Not on your lists

comp(3..344)
DNA (342bp) protein (114aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_58_curated_2
Cyclobacterium qasimii, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(370..1824)
DNA (1455bp) protein (485aa)
Arylsulfatase {ECO:0000313|EMBL:EPR65551.1}; EC=3.1.6.1 {ECO:0000313|EMBL:EPR65551.1};; TaxID=641524 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium qasimii M12-11B.;"
Arylsulfatase n=1 Tax=Cyclobacterium qasimii M12-11B RepID=S7V6I1_9BACT
sulfatase
scnpilot_solids1_trim150_scaffold_58_curated_3
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2134..2340)
DNA (207bp) protein (69aa)
Putative uncharacterized protein n=1 Tax=Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338) RepID=G8UR18_TANFA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAO43243.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
scnpilot_solids1_trim150_scaffold_58_curated_4
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2528..3118)
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036456B0
Uncharacterized protein {ECO:0000313|EMBL:GAO43243.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_58_curated_5
Cyclobacterium qasimii, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(3230..4759)
DNA (1530bp) protein (510aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000362C63B
Putative nutrient binding outer membrane protein {ECO:0000313|EMBL:EPR66991.1}; TaxID=641524 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium qasimii M12-11B.;"
RagB/SusD domain-containing protein
scnpilot_solids1_trim150_scaffold_58_curated_6
Cyclobacterium qasimii, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(4778..8212)
DNA (3435bp) protein (1145aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037E1998
TonB-dependent receptor {ECO:0000313|EMBL:EPR66992.1}; TaxID=641524 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium qasimii M12-11B.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_58_curated_7
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8531..9682)
DNA (1152bp) protein (384aa)
anti-FecI sigma factor FecR n=1 Tax=Cytophagales str. B6 RepID=UPI0003B73B0A
Putative anti-sigma factor {ECO:0000313|EMBL:GAO43071.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
anti-FecI sigma factor FecR
scnpilot_solids1_trim150_scaffold_58_curated_8
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9859..10431
DNA (573bp) protein (191aa)
RNA polymerase sigma-70 factor n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y2W3_PEDHD
RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:ACU03176.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_solids1_trim150_scaffold_58_curated_9
RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated, Bacteroidetes, Bacteria

Not on your lists

10756..11610
DNA (855bp) protein (285aa)
DNA-damage-inducible protein D id=4782287 bin=GWC2_Bacteroidetes_40_22 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_22 organism_group=Bacteroidetes
DNA-damage-inducible protein D family protein; K14623 DNA-damage-inducible protein D
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated
scnpilot_solids1_trim150_scaffold_58_curated_10
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

11607..12365
DNA (759bp) protein (253aa)
Metallophosphoesterase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1I8_PALPW
metallophosphoesterase
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids1_trim150_scaffold_58_curated_11
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12528..14204)
DNA (1677bp) protein (559aa)
ribonucleotide-diphosphate reductase subunit alpha; K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Ribonucleoside-diphosphate reductase, alpha chain {ECO:0000313|EMBL:ACU60898.1}; EC=1.17.4.1 {ECO:0000313|EMBL:ACU60898.1};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Ribonucleoside-diphosphate reductase, alpha chain n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PTA8_CHIPD
scnpilot_solids1_trim150_scaffold_58_curated_12
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14326..15300)
DNA (975bp) protein (325aa)
ribonucleotide reductase; K00526 ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
Ribonucleotide reductase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PTA9_CHIPD
Ribonucleotide reductase {ECO:0000313|EMBL:ACU60899.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids1_trim150_scaffold_58_curated_13
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15801..16439)
DNA (639bp) protein (213aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
thymidylate kinase; K00943 dTMP kinase [EC:2.7.4.9]
Thymidylate kinase n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GY24_9SPHI
scnpilot_solids1_trim150_scaffold_58_curated_14
unknown

Not on your lists

16571..16783
DNA (213bp) protein (71aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_58_curated_15
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16805..18355)
DNA (1551bp) protein (517aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003829AC5
Uncharacterized protein {ECO:0000313|EMBL:KIC91741.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
siroheme synthase
scnpilot_solids1_trim150_scaffold_58_curated_16
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18448..20163)
DNA (1716bp) protein (572aa)
sulfite reductase (NADPH) beta subunit; K00381 sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
Sulfite reductase (NADPH) beta subunit {ECO:0000313|EMBL:AEW03203.1}; EC=1.8.1.2 {ECO:0000313|EMBL:AEW03203.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036AA181
scnpilot_solids1_trim150_scaffold_58_curated_17
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20247..21947)
DNA (1701bp) protein (567aa)
NADPH--hemoprotein reductase; K00380 sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
NADPH--hemoprotein reductase {ECO:0000313|EMBL:AEW03202.1}; EC=1.6.2.4 {ECO:0000313|EMBL:AEW03202.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035ED05A
scnpilot_solids1_trim150_scaffold_58_curated_18
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21937..22785)
DNA (849bp) protein (283aa)
uroporphyrin-III C-methyltransferase; K02302 uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
Uroporphyrin-III C-methyltransferase {ECO:0000313|EMBL:AEW03201.1}; EC=2.1.1.107 {ECO:0000313|EMBL:AEW03201.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003810B77
scnpilot_solids1_trim150_scaffold_58_curated_19
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22834..24075)
DNA (1242bp) protein (414aa)
Sulfate adenylyltransferase subunit 1 {ECO:0000256|SAAS:SAAS00056000}; EC=2.7.7.4 {ECO:0000256|SAAS:SAAS00055979};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Sulfate adenylyltransferase subunit 1 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQF1_NIAKG
sulfate adenylyltransferase subunit 1
scnpilot_solids1_trim150_scaffold_58_curated_20
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24178..25086)
DNA (909bp) protein (303aa)
sulfate adenylyltransferase, small subunit; K00957 sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
Sulfate adenylyltransferase {ECO:0000256|SAAS:SAAS00055732}; EC=2.7.7.4 {ECO:0000256|SAAS:SAAS00055732};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Sulfate adenylyltransferase, small subunit n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQF0_NIAKG
scnpilot_solids1_trim150_scaffold_58_curated_21
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

25598..26521
DNA (924bp) protein (308aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
phosphoribosylaminoimidazolesuccinocarboxamide synthase; K01923 phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T6R3_NIAKG
scnpilot_solids1_trim150_scaffold_58_curated_22
Microcystis aeruginosa, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

26750..27355
DNA (606bp) protein (202aa)
Tetratricopeptide repeat protein n=1 Tax=Microcystis aeruginosa (strain NIES-843) RepID=B0JN19_MICAN
hypothetical protein
Tetratricopeptide repeat protein {ECO:0000313|EMBL:BAG00183.1}; TaxID=449447 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.;" source="Microcystis aeruginosa (strain NIES-843).;"
scnpilot_solids1_trim150_scaffold_58_curated_23
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

27540..28265
DNA (726bp) protein (242aa)
hypothetical protein n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B5E30E
Uncharacterized protein {ECO:0000313|EMBL:KIA93369.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_58_curated_24

Not on your lists

comp(28291..28581)
DNA (291bp) protein (97aa)
Putative integron gene cassette protein n=1 Tax=uncultured bacterium RepID=B0BFI9_9BACT
Putative integron gene cassette protein {ECO:0000313|EMBL:CAP47547.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_58_curated_25
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28635..29696)
DNA (1062bp) protein (354aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036BF5C7
UPF0176 protein OI18_08945 {ECO:0000256|HAMAP-Rule:MF_00469}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
rhodanese domain-containing protein; K07146 UPF0176 protein
scnpilot_solids1_trim150_scaffold_58_curated_26
Anditalea andensis, Anditalea, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

29870..30463
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCD9_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KEO74913.1}; TaxID=1048983 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Anditalea.;" source="Anditalea andensis.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_58_curated_27
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30567..32273)
DNA (1707bp) protein (569aa)
Peptidase S8 and S53 subtilisin kexin sedolisin n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQY5_NIAKG
peptidase S8 and S53 subtilisin kexin sedolisin
Peptidase S8 and S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:AEV97884.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_58_curated_28
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

32571..32963
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NKW1_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF14391.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_58_curated_29
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(33214..34740)
DNA (1527bp) protein (509aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000372E422
Aldehyde dehydrogenase {ECO:0000313|EMBL:GAO44407.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
L-aminoadipate-semialdehyde dehydrogenase
scnpilot_solids1_trim150_scaffold_58_curated_30
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(34827..35642)
DNA (816bp) protein (272aa)
ketopantoate hydroxymethyltransferase; K00606 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopantoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TR11_NIAKG
Displaying items 1-30 of 126 in total

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