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scnpilot_solids1_trim150_scaffold_13_curated

Search features with annotation key words

Displaying items 1-30 of 225 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_13_curated_1
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

622..903
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8Y4_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02341.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_13_curated_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1476..2516
DNA (1041bp) protein (347aa)
Relaxase/mobilization nuclease family protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJG1_NIAKG
Relaxase/mobilization nuclease family protein
Relaxase/mobilization nuclease family protein {ECO:0000313|EMBL:AEV99696.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_13_curated_3
unknown

Not on your lists

2845..3174
DNA (330bp) protein (110aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_13_curated_4
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3339..4982
DNA (1644bp) protein (548aa)
Resolvase domain protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PJG5_CHIPD
resolvase domain-containing protein
Resolvase domain protein {ECO:0000313|EMBL:ACU63725.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids1_trim150_scaffold_13_curated_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5227..7206
DNA (1980bp) protein (660aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
DNA gyrase subunit B; K02470 DNA gyrase subunit B [EC:5.99.1.3]
DNA gyrase subunit B n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMK0_NIAKG
scnpilot_solids1_trim150_scaffold_13_curated_6
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(7213..7725)
DNA (513bp) protein (171aa)
Putative uncharacterized protein id=2725056 bin=GWC2_Ignavibacteria_56_12 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
hypothetical protein
Tax=GWA2_Ignavibacteria_54_16_curated
scnpilot_solids1_trim150_scaffold_13_curated_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(7828..9186)
DNA (1359bp) protein (453aa)
Alpha-N-acetylgalactosaminidase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TR04_NIAKG
Alpha-N-acetylgalactosaminidase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids1_trim150_scaffold_13_curated_8
Saccharicrinis fermentans, Saccharicrinis, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9275..11758)
DNA (2484bp) protein (828aa)
hypothetical protein n=1 Tax=WS1 bacterium JGI 0000059-K21 RepID=UPI00036BAC41
3-ketosteroid-delta-1-dehydrogenase {ECO:0000313|EMBL:GAF04087.1}; TaxID=869213 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Saccharicrinis.;" source="Saccharicrinis fermentans DSM 9555 = JCM 21142.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_13_curated_9
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11835..12614)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NS57_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF16037.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_13_curated_10
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(12924..15734)
DNA (2811bp) protein (937aa)
Beta-galactosidase {ECO:0000313|EMBL:CCH52220.1}; EC=3.2.1.23 {ECO:0000313|EMBL:CCH52220.1};; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
Beta-galactosidase n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GE95_9BACT
glycoside hydrolase
scnpilot_solids1_trim150_scaffold_13_curated_11
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(15885..18509)
DNA (2625bp) protein (875aa)
Uncharacterized protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GE92_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCH52217.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_13_curated_12
Coraliomargarita akajimensis, Coraliomargarita, Puniceicoccales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(18578..19342)
DNA (765bp) protein (255aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00035CFDCE
glycoside hydrolase
Glycoside hydrolase family 16 {ECO:0000313|EMBL:ADE53086.1}; TaxID=583355 species="Bacteria; Verrucomicrobia; Opitutae; Puniceicoccales; Puniceicoccaceae; Coraliomargarita.;" source="Coraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193; / KCTC 12865).;"
scnpilot_solids1_trim150_scaffold_13_curated_13
Cyclobacteriaceae bacterium AK24, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(19712..21934)
DNA (2223bp) protein (741aa)
Uncharacterized protein n=1 Tax=Cyclobacteriaceae bacterium AK24 RepID=R7ZU01_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EON77557.1}; TaxID=1288963 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; unclassified Cyclobacteriaceae.;" source="Cyclobacteriaceae bacterium AK24.;"
glycoside hydrolase
scnpilot_solids1_trim150_scaffold_13_curated_14
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22107..23393)
DNA (1287bp) protein (429aa)
beta-glucanase precursor; K01216 licheninase [EC:3.2.1.73]
Glycoside hydrolase family 16 n=1 Tax=Niabella soli DSM 19437 RepID=H1NS56_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF17803.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
scnpilot_solids1_trim150_scaffold_13_curated_15
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23480..25153)
DNA (1674bp) protein (558aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI0003657784
SusD family.
SusD family {ECO:0000313|EMBL:CBK62772.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
scnpilot_solids1_trim150_scaffold_13_curated_16
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25174..28194)
DNA (3021bp) protein (1007aa)
Outer membrane receptor proteins, mostly Fe transport n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IIL2_9BACT
Outer membrane receptor proteins, mostly Fe transport {ECO:0000313|EMBL:CBK62771.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
Outer membrane receptor proteins, mostly Fe transport
scnpilot_solids1_trim150_scaffold_13_curated_17
Formosa agariphila, Formosa, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28235..30517)
DNA (2283bp) protein (761aa)
Fumarate reductase/succinate dehydrogenase flavo protein-like protein n=1 Tax=Formosa agariphila KMM 3901 RepID=T2KLT3_9FLAO
Fumarate reductase/succinate dehydrogenase flavo protein-like protein {ECO:0000313|EMBL:CDF79837.1}; TaxID=1347342 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Formosa.;" source="Formosa agariphila KMM 3901.;"
fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein
scnpilot_solids1_trim150_scaffold_13_curated_18
Saccharicrinis fermentans, Saccharicrinis, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30533..32203)
DNA (1671bp) protein (557aa)
Sodium/solute symporter n=1 Tax=Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij) RepID=G0L1A9_ZOBGA
Na(+)/glucose symporter {ECO:0000313|EMBL:GAF05036.1}; TaxID=869213 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Saccharicrinis.;" source="Saccharicrinis fermentans DSM 9555 = JCM 21142.;"
sodium/solute symporter
scnpilot_solids1_trim150_scaffold_13_curated_19
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(32850..33428)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PJZ3_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU58334.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids1_trim150_scaffold_13_curated_20
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(34382..34588)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7X1_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV96909.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_13_curated_21
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(34633..35688)
DNA (1056bp) protein (352aa)
Glycosyl transferase family 2 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7X0_NIAKG
Glycosyl transferase family 2 {ECO:0000313|EMBL:KIC91332.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
family 2 glycosyl transferase
scnpilot_solids1_trim150_scaffold_13_curated_22
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

35762..36910
DNA (1149bp) protein (383aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000379BE99
integral membrane sensor signal transduction histidine kinase
scnpilot_solids1_trim150_scaffold_13_curated_23
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

36978..37628
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Winogradskyella psychrotolerans RS-3 RepID=S7VXA5_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFF15642.1}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cytophaga aquatilis).;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_13_curated_24
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

37861..39126
DNA (1266bp) protein (422aa)
hypothetical protein n=1 Tax=Pedobacter agri RepID=UPI00029A2DE8
Uncharacterized protein {ECO:0000313|EMBL:ETZ20129.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_13_curated_25
Sphingobacterium paucimobilis, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

39218..39886
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2HQ28_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:ERJ57400.1}; TaxID=1346330 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium paucimobilis HER1398.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_13_curated_26
unknown

Not on your lists

40186..40383
DNA (198bp) protein (66aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_13_curated_27
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

40410..41084
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9B1_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:GAO43341.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_13_curated_28
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(41346..41981)
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000378B900
4'-phosphopantetheinyl transferase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids1_trim150_scaffold_13_curated_29
candidate division TM7 genomosp. GTL1, Candidatus Saccharibacteria, Bacteria

Not on your lists

42049..42585
DNA (537bp) protein (179aa)
dCTP deaminase; K01494 dCTP deaminase [EC:3.5.4.13]
Deoxycytidine triphosphate deaminase n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KRU7_9BACT
Deoxycytidine triphosphate deaminase {ECO:0000313|EMBL:EDK72839.1}; TaxID=443342 species="Bacteria; Candidatus Saccharibacteria.;" source="candidate division TM7 genomosp. GTL1.;"
scnpilot_solids1_trim150_scaffold_13_curated_30
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

42757..43878
DNA (1122bp) protein (374aa)
5-(carboxyamino)imidazole ribonucleotide synthase; K01589 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
N5-carboxyaminoimidazole ribonucleotide synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Short=N5-CAIR synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; EC=6.3.4.18 {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; 5-(carboxyamino)imidazole ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastel
5-(Carboxyamino)imidazole ribonucleotide synthase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPS3_NIAKG
Displaying items 1-30 of 225 in total

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