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scnpilot_solids1_trim150_scaffold_768_curated

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_768_curated_1
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(60..1355)
DNA (1296bp) protein (432aa)
Type IV secretion system protein VirD4 n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GRK7_9BACT
Type IV secretion system protein VirD4 {ECO:0000313|EMBL:CCH56535.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
TRAG family protein; K03205 type IV secretion system protein VirD4
scnpilot_solids1_trim150_scaffold_768_curated_2
unknown

Not on your lists

comp(1450..1644)
DNA (195bp) protein (65aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_768_curated_3
unknown

Not on your lists

2076..2333
DNA (258bp) protein (86aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_768_curated_4
unknown

Not on your lists

comp(2309..2527)
DNA (219bp) protein (73aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_768_curated_5
unknown

Not on your lists

2690..2998
DNA (309bp) protein (103aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_768_curated_6
unknown

Not on your lists

3045..4127
DNA (1083bp) protein (361aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_768_curated_7
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

4298..4993
DNA (696bp) protein (232aa)
Site-specific recombinase n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GU84_9BACT
Site-specific recombinase {ECO:0000313|EMBL:CCH57685.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
resolvase
scnpilot_solids1_trim150_scaffold_768_curated_8
unknown

Not on your lists

5031..5684
DNA (654bp) protein (218aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_768_curated_9
unknown

Not on your lists

5759..6088
DNA (330bp) protein (110aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_768_curated_10
CG_Moran_01, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(6160..7527)
DNA (1368bp) protein (456aa)
outer membrane protein id=5100250 bin=WS6_GWC1_33_20 species=WS6_GWF1_33_233 genus=WS6_GWF1_33_233 taxon_order=WS6_GWF1_33_233 taxon_class=WS6_GWF1_33_233 phylum=WS6 tax=WS6_GWC1_33_20 organism_group=WS6 (Doikabacteria)
hypothetical protein
Tax=CG_Moran_01
scnpilot_solids1_trim150_scaffold_768_curated_11
R_Alphaproteobacteria_46_13, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8216..9394
DNA (1179bp) protein (393aa)
Integrase family protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y5N1_9SPHI
Integrase
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_46_13_curated
scnpilot_solids1_trim150_scaffold_768_curated_12
unknown

Not on your lists

comp(9472..9783)
DNA (312bp) protein (104aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_768_curated_13
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10059..10280
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0TBC9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCE03756.1}; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3809.;"
transcriptional regulator
scnpilot_solids1_trim150_scaffold_768_curated_14
unknown

Not on your lists

10308..11324
DNA (1017bp) protein (339aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_768_curated_15
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11394..12278
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PIT2_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU58271.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids1_trim150_scaffold_768_curated_16
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12286..13110
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PIS9_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU58268.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids1_trim150_scaffold_768_curated_17
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13532..14038)
DNA (507bp) protein (169aa)
Outer membrane transport energization protein ExbD n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TRW6_NIAKG
Putative ExbD/TolR family membrane protein {ECO:0000313|EMBL:GAO41471.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
outer membrane transport energization protein ExbD
scnpilot_solids1_trim150_scaffold_768_curated_18
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

14492..15838
DNA (1347bp) protein (449aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00035D440E
metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:ACT92645.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_solids1_trim150_scaffold_768_curated_19
unknown

Not on your lists

comp(15975..16100)
DNA (126bp) protein (42aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_768_curated_20
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16210..17700
DNA (1491bp) protein (497aa)
Type I phosphodiesterase/nucleotide pyrophosphatase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUC1_CHIPD
type I phosphodiesterase/nucleotide pyrophosphatase
Type I phosphodiesterase/nucleotide pyrophosphatase {ECO:0000313|EMBL:ACU59161.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids1_trim150_scaffold_768_curated_21
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17739..18524
DNA (786bp) protein (262aa)
Putative multi-domain protein n=1 Tax=Mariniradius saccharolyticus AK6 RepID=M7X077_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KIC96097.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_768_curated_22
unknown

Not on your lists

18540..18725
DNA (186bp) protein (62aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_768_curated_23
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

18869..19729
DNA (861bp) protein (287aa)
AraC family transcriptional regulator n=1 Tax=Dyadobacter beijingensis RepID=UPI0003707768
AraC family transcriptional regulator {ECO:0000313|EMBL:AHM61141.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
AraC family transcriptional regulator
scnpilot_solids1_trim150_scaffold_768_curated_24
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

19842..21086
DNA (1245bp) protein (415aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VW01_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT93133.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_solids1_trim150_scaffold_768_curated_25
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

21182..21895
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EHJ4_RUNSL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI47151.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
scnpilot_solids1_trim150_scaffold_768_curated_26
unknown

Not on your lists

21972..22112
DNA (141bp) protein (47aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_768_curated_27
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

22136..23032
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036AD9F2
aldo/keto reductase
Aldo/keto reductase {ECO:0000313|EMBL:AEW03517.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_768_curated_28
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23386..23862
DNA (477bp) protein (159aa)
Transcriptional regulator, AsnC family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TG74_NIAKG
transcriptional regulator, AsnC family; K03718 Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:AEW02713.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids1_trim150_scaffold_768_curated_29
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23924..25048)
DNA (1125bp) protein (375aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000361340A
glycosyl transferase family protein
Glycosyltransferase 28 domain protein {ECO:0000313|EMBL:ACU58208.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids1_trim150_scaffold_768_curated_30
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

25333..25578
DNA (246bp) protein (82aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003802C62
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02314.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Displaying items 1-30 of 46 in total

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