ggKbase home page

scnpilot_solids1_trim150_scaffold_779_curated_17

Organism: solids_Sphingobacteriales_4

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: 18473..20542

Top 3 Functional Annotations

Value Algorithm Source
protein-xanthan lyase n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001744DE2 similarity UNIREF
DB: UNIREF100
  • Identity: 32.6
  • Coverage: 552.0
  • Bit_score: 254
  • Evalue 2.60e-64
Uncharacterized protein {ECO:0000313|EMBL:ETR79132.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 35.9
  • Coverage: 671.0
  • Bit_score: 392
  • Evalue 1.50e-105
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 30.8
  • Coverage: 562.0
  • Bit_score: 247
  • Evalue 9.90e-63

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia sp. P52-10 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2070
ATGCGATTAGTAATAATATCTGTGTTGGTTCTTATTAATAATTTGGTTTATTCACAAACCAACCGTTCCTCTTCACAAAAGGCAACTTATTATGATATAGTGGTAATAGGAGGCACCCCTGCAGGGGTAGCCGCTTCTATTGCCGCAGGGCGGCTTGGTAAATCGGTAATGTTGGTGGAACAGTCACCTGTGCTGGGAGGAGTACTTTCATCAGGGGTGAATCGCCTGGATGATTATCTGGTGGAAGGGAATAGCGGCATTATGGAAGAATGGAGATCGCGCGTAGAGAAGTATAATGTCACTGAATTAAAGAATGATCCTGTAGTACAACATGATATGAAAGTGCCGGACCATCGCTGGAGTACAGCACAGGGGAGAGGCTGGGAGCCCAAAACAGCGGCTAAAATTTATGCGCAGATGGTAGCTGAAGTACCATCCATCCAAACCAGATTTAATGAAGTGCCTGTGGGCGCAAAAGTTGAAAATGGCAGAATAACAGCAGTTATCACGCAAGACCGCGATAACAAAGGCCGCCTCGGAGCCAAACACACTTATACGGGACGTATCATCATTGATGCTACTTATGAAGGTGATGTTGCTGCCTTTGCCGGCGTGCCTTTCCGCGTTGGCAGAGAAGCGCGTTCCAAAGAAGAACCACATGCCGGTAAAATATATACAGAAGCCTTCGGCTCCGGAAGGGGGACATTAAAAGGCGCTATGTTTCCCGGCAGCACAGGAGAAGCAGATAACAGGATGCAGGCGTTTACATTTCGCTTTACCGTAAAAGACTATGGACGGCCGGATCATCCCTATCGCCTTACTTCGCCACCGCCTGGATATGACTCTACCTTGTATAACTGGAATCCTGACACAAAGCCCTGGCTGCCCAATAAAAAAGCTGATATGCTCGGAGCCGGTGATTTGACAGGATATTCCACACAGTATGTGCTGGCAGGATGGGAGGAAAGAACCAAACTTGAAAAGATCTATCGCAATCATGAACTTGGCTGGCTATATTATATTCAAACCAAAGGAAATTCACCGCAATGGGGGCTTGCCGATGATGAATTCAAAGATAATGGCAACTGGCCTTACCGGCTTTATGTGCGTGAAGGCCGGAGGATTGATGGCTTATACAGGCTTACTGAAAGCGACATCCACAAAGACCTGAGAGGGAACGGCTTTCGGGGGCCACTGCATAAAGATGGTATAGCCATAGGCGTTTATCCGATAGATTCGCATTTTGTGCAAAGCCCGACTTCGGAGTCGTCCCACGGAGAGGGCTCTATACACCTCAATGATGCAACAGGTCCCTACCAGATTCCTTACGGTGTAATGGTGCCTAAAAAACTAAATGGATTACTGGTGCCGGTAGCCATTTCTGCCACTCATGTAGCCATTTCTGCCGTAAGGATGGAGCCCGTGTGGTCTTCATTAGGGCAGGCAGCGGGTGTGGCGGCTGCTGTGGCGCTTAATGATGGAAGCGAGATAAGAGATGTTTCTGTCCCGGAAGTTCAGGATATATTATTACAGCAGGAATGCCTGCTTTTTTTCTACAAAGACATGCCGGTAGATCGTGATTTTTACAATGCTACGCCTGGCGACAGCGTTGAATTTAAAGCCATTCAGAAACTAAGCCTGAAAGGCGCATTAGATGGAGATGAGAATTATTATTTTCGCGCAGGCCAGCCCATAACCTTAGGCGAATTTGCGCGGTTGGCGGTAAACGGCCTTAATATTCCACTAAGCATTACCGCAGCCCATTTTAATGATGTGCCAAGGAGCCATCCTTATTTTAAATATATAGAGACGCTATACGATTATTCTACGCAAGCGGCGAAGCCTTTCTTTATCTATGAAGTGCGAAACTATATGAACTACTGGTGGGGAAACCCTTCCTTGCAAGGTCCGCCCGTGTATGCCTATCCCGATCATGCAGTTTCCGGCAGGCAGGCTCTCGAAATTATTTCCGGCTTAGTGCAAAAGCAAATATCCGGTTCTGAAATAAATGACGCTGTTCTAACGAGGGGAGAAGCAGCTTTATTGGTTTATCATATGTTAAGCAAATAG
PROTEIN sequence
Length: 690
MRLVIISVLVLINNLVYSQTNRSSSQKATYYDIVVIGGTPAGVAASIAAGRLGKSVMLVEQSPVLGGVLSSGVNRLDDYLVEGNSGIMEEWRSRVEKYNVTELKNDPVVQHDMKVPDHRWSTAQGRGWEPKTAAKIYAQMVAEVPSIQTRFNEVPVGAKVENGRITAVITQDRDNKGRLGAKHTYTGRIIIDATYEGDVAAFAGVPFRVGREARSKEEPHAGKIYTEAFGSGRGTLKGAMFPGSTGEADNRMQAFTFRFTVKDYGRPDHPYRLTSPPPGYDSTLYNWNPDTKPWLPNKKADMLGAGDLTGYSTQYVLAGWEERTKLEKIYRNHELGWLYYIQTKGNSPQWGLADDEFKDNGNWPYRLYVREGRRIDGLYRLTESDIHKDLRGNGFRGPLHKDGIAIGVYPIDSHFVQSPTSESSHGEGSIHLNDATGPYQIPYGVMVPKKLNGLLVPVAISATHVAISAVRMEPVWSSLGQAAGVAAAVALNDGSEIRDVSVPEVQDILLQQECLLFFYKDMPVDRDFYNATPGDSVEFKAIQKLSLKGALDGDENYYFRAGQPITLGEFARLAVNGLNIPLSITAAHFNDVPRSHPYFKYIETLYDYSTQAAKPFFIYEVRNYMNYWWGNPSLQGPPVYAYPDHAVSGRQALEIISGLVQKQISGSEINDAVLTRGEAALLVYHMLSK*