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scnpilot_solids1_trim150_scaffold_779_curated

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_779_curated_1
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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387..1202
DNA (816bp) protein (272aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037A3C82
Oxidoreductase {ECO:0000313|EMBL:AHF14611.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
short-chain dehydrogenase/reductase SDR
scnpilot_solids1_trim150_scaffold_779_curated_2
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1192..2316
DNA (1125bp) protein (375aa)
pyridoxal-5'-phosphate-dependent protein beta subunit; K01733 threonine synthase [EC:4.2.3.1]
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003828D80
Threonine synthase {ECO:0000313|EMBL:AHF14612.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
scnpilot_solids1_trim150_scaffold_779_curated_3
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2331..3239
DNA (909bp) protein (303aa)
dihydrodipicolinate synthetase; K01639 N-acetylneuraminate lyase [EC:4.1.3.3]
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003669AE6
Dihydrodipicolinate synthetase {ECO:0000313|EMBL:AHF14607.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
scnpilot_solids1_trim150_scaffold_779_curated_4
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3415..3795
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036BE8DB
endoribonuclease L-PSP
Endoribonuclease L-PSP {ECO:0000313|EMBL:ACU05763.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_solids1_trim150_scaffold_779_curated_5
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3812..4618
DNA (807bp) protein (269aa)
SMP-30/gluconolaconase/LRE domain-containing protein; K01053 gluconolactonase [EC:3.1.1.17]
SMP-30/Gluconolaconase/LRE domain protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XTI3_PEDHD
SMP-30/Gluconolaconase/LRE domain protein {ECO:0000313|EMBL:ACU05761.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_solids1_trim150_scaffold_779_curated_6
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4711..5655
DNA (945bp) protein (315aa)
Aldo/keto reductase n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XTI1_PEDHD
aldo/keto reductase
Aldo/keto reductase {ECO:0000313|EMBL:ACU05759.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_solids1_trim150_scaffold_779_curated_7
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5674..6456
DNA (783bp) protein (261aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XTI0_PEDHD
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACU05758.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_solids1_trim150_scaffold_779_curated_8
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6597..7844
DNA (1248bp) protein (416aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003644E61
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACU05757.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_solids1_trim150_scaffold_779_curated_9
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

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7878..8783
DNA (906bp) protein (302aa)
Aldo/keto reductase n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XTH7_PEDHD
aldo/keto reductase
Tax=GWF2_Verrucomicrobia_62_7_curated
scnpilot_solids1_trim150_scaffold_779_curated_10
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

8802..10097
DNA (1296bp) protein (432aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036E8A76
class III aminotransferase
Aminotransferase class-III {ECO:0000313|EMBL:ACT93124.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_solids1_trim150_scaffold_779_curated_11
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10139..10534)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NN13_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EDS16173.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_779_curated_12
unknown

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comp(10860..10967)
DNA (108bp) protein (36aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_779_curated_13
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11282..11878
DNA (597bp) protein (199aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PTL4_CHIPD
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACU62771.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids1_trim150_scaffold_779_curated_14
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11959..13155
DNA (1197bp) protein (399aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037811F6
Putative anti-sigma factor {ECO:0000313|EMBL:EDM34881.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;"
FecR protein
scnpilot_solids1_trim150_scaffold_779_curated_15
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13367..16714
DNA (3348bp) protein (1116aa)
TonB-dependent receptor plug id=4715997 bin=GWA2_Bacteroidetes_42_15 species=Dyadobacter fermentans genus=Dyadobacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
TonB-dependent receptor plug
Tax=GWE2_Bacteroidetes_42_39_curated
scnpilot_solids1_trim150_scaffold_779_curated_16
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16761..18242
DNA (1482bp) protein (494aa)
RagB/SusD domain-containing protein id=4715996 bin=GWA2_Bacteroidetes_42_15 species=Cyclobacterium marinum genus=Cyclobacterium taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
RagB/SusD domain-containing protein
Tax=GWE2_Bacteroidetes_42_39_curated
scnpilot_solids1_trim150_scaffold_779_curated_17
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18473..20542
DNA (2070bp) protein (690aa)
protein-xanthan lyase n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001744DE2
Uncharacterized protein {ECO:0000313|EMBL:ETR79132.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_779_curated_18
RBG_19FT_COMBO_Planctomycetes_48_8_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

21116..21418
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003818C14
sulfatase
Tax=RBG_19FT_COMBO_Planctomycetes_48_8_curated
Displaying 18 items

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